Transcript: ENST00000473164.2 MZF1-AS1-201

Description

MZF1 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:51271]

Location

Chromosome 19: 58,575,415-58,599,851 forward strand.

About this transcript

This transcript has 3 exons and maps to 848 oligo probes.

Gene

This transcript is a product of gene ENSG00000267858.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000789831.1	MZF1-AS1-213	940	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000651608.2	MZF1-AS1-208	8467	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000493504.1	MZF1-AS1-204	3282	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000652551.1	MZF1-AS1-209	3256	No protein	-	lncRNA	-	-
ENST00000600534.1	MZF1-AS1-206	2567	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000789850.1	MZF1-AS1-232	2334	No protein	-	lncRNA	-	-
ENST00000692455.3	MZF1-AS1-211	1990	No protein	-	lncRNA	-	-
ENST00000789846.1	MZF1-AS1-228	1443	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000487264.6	MZF1-AS1-203	1333	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000716556.1	MZF1-AS1-212	1293	No protein	-	lncRNA	-	-
ENST00000473164.2	MZF1-AS1-201	1261	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000479047.2	MZF1-AS1-202	1192	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000789839.1	MZF1-AS1-221	1177	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000789851.1	MZF1-AS1-233	1155	No protein	-	lncRNA	-	-
ENST00000789858.1	MZF1-AS1-240	1142	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000789837.1	MZF1-AS1-219	1083	No protein	-	lncRNA	-	-
ENST00000600726.6	MZF1-AS1-207	1081	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000789874.1	MZF1-AS1-256	1076	No protein	-	lncRNA	-	-
ENST00000789877.1	MZF1-AS1-259	1071	No protein	-	lncRNA	-	-
ENST00000789836.1	MZF1-AS1-218	1065	No protein	-	lncRNA	-	-
ENST00000789838.1	MZF1-AS1-220	1062	No protein	-	lncRNA	-	-
ENST00000789875.1	MZF1-AS1-257	1016	No protein	-	lncRNA	-	-
ENST00000789849.1	MZF1-AS1-231	996	No protein	-	lncRNA	-	-
ENST00000789842.1	MZF1-AS1-224	989	No protein	-	lncRNA	-	-
ENST00000789840.1	MZF1-AS1-222	985	No protein	-	lncRNA	-	-
ENST00000789852.1	MZF1-AS1-234	979	No protein	-	lncRNA	-	-
ENST00000789844.1	MZF1-AS1-226	950	No protein	-	lncRNA	-	-
ENST00000789847.1	MZF1-AS1-229	894	No protein	-	lncRNA	-	-
ENST00000789848.1	MZF1-AS1-230	887	No protein	-	lncRNA	-	-
ENST00000789879.1	MZF1-AS1-261	881	No protein	-	lncRNA	-	-
ENST00000789853.1	MZF1-AS1-235	860	No protein	-	lncRNA	-	-
ENST00000789832.1	MZF1-AS1-214	820	No protein	-	lncRNA	-	-
ENST00000789845.1	MZF1-AS1-227	819	No protein	-	lncRNA	-	-
ENST00000789841.1	MZF1-AS1-223	815	No protein	-	lncRNA	-	-
ENST00000653470.1	MZF1-AS1-210	802	No protein	-	lncRNA	-	-
ENST00000789843.1	MZF1-AS1-225	766	No protein	-	lncRNA	-	-
ENST00000789854.1	MZF1-AS1-236	751	No protein	-	lncRNA	-	-
ENST00000789835.1	MZF1-AS1-217	740	No protein	-	lncRNA	-	-
ENST00000789833.1	MZF1-AS1-215	714	No protein	-	lncRNA	-	-
ENST00000789872.1	MZF1-AS1-254	709	No protein	-	lncRNA	-	-
ENST00000593642.6	MZF1-AS1-205	706	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000789863.1	MZF1-AS1-245	684	No protein	-	lncRNA	-	-
ENST00000789856.1	MZF1-AS1-238	663	No protein	-	lncRNA	-	-
ENST00000789857.1	MZF1-AS1-239	662	No protein	-	lncRNA	-	-
ENST00000789834.1	MZF1-AS1-216	659	No protein	-	lncRNA	-	-
ENST00000789871.1	MZF1-AS1-253	631	No protein	-	lncRNA	-	-
ENST00000789880.1	MZF1-AS1-262	610	No protein	-	lncRNA	-	-
ENST00000789873.1	MZF1-AS1-255	609	No protein	-	lncRNA	-	-
ENST00000789862.1	MZF1-AS1-244	606	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000789864.1	MZF1-AS1-246	592	No protein	-	lncRNA	-	-
ENST00000789860.1	MZF1-AS1-242	584	No protein	-	lncRNA	-	-
ENST00000789870.1	MZF1-AS1-252	578	No protein	-	lncRNA	-	-
ENST00000789868.1	MZF1-AS1-250	577	No protein	-	lncRNA	-	-
ENST00000789866.1	MZF1-AS1-248	571	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000789869.1	MZF1-AS1-251	567	No protein	-	lncRNA	-	-
ENST00000789861.1	MZF1-AS1-243	553	No protein	-	lncRNA	-	-
ENST00000789865.1	MZF1-AS1-247	534	No protein	-	lncRNA	-	-
ENST00000789855.1	MZF1-AS1-237	513	No protein	-	lncRNA	-	-
ENST00000789878.1	MZF1-AS1-260	501	No protein	-	lncRNA	-	-
ENST00000789859.1	MZF1-AS1-241	496	No protein	-	lncRNA	-	-
ENST00000789876.1	MZF1-AS1-258	446	No protein	-	lncRNA	-	-
ENST00000789867.1	MZF1-AS1-249	416	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 1,261 bps,

Transcript Support Level (TSL)

TSL:2

Version

ENST00000473164.2

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000473164.2 MZF1-AS1-201

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Transcript: ENST00000473164.2 MZF1-AS1-201

Summary

About Us

Get help

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