Transcript: ENST00000457719.1

Description

novel transcript

Location

Chromosome 1: 119,260,265-119,327,303 reverse strand.

About this transcript

This transcript has 3 exons and maps to 137 oligo probes.

Gene

This transcript is a product of gene ENSG00000227712.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000840369.1	-	714	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000701423.2	-	2414	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000840373.1	-	1934	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000660871.1	-	1723	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000840380.1	-	1681	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000840377.1	-	1163	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000840376.1	-	1149	No protein	-	lncRNA	-	-
ENST00000653227.2	-	1051	No protein	-	lncRNA	-	-
ENST00000840375.1	-	1039	No protein	-	lncRNA	-	-
ENST00000840378.1	-	954	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000840379.1	-	932	No protein	-	lncRNA	-	-
ENST00000840381.1	-	926	No protein	-	lncRNA	-	-
ENST00000457719.1	-	898	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000655614.1	-	722	No protein	-	lncRNA	-	-
ENST00000840374.1	-	722	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000840370.1	-	656	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000840371.1	-	655	No protein	-	lncRNA	-	-
ENST00000840383.1	-	585	No protein	-	lncRNA	-	-
ENST00000840384.1	-	568	No protein	-	lncRNA	-	-
ENST00000840372.1	-	508	No protein	-	lncRNA	-	-
ENST00000840382.1	-	204	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 898 bps,

Transcript Support Level (TSL)

TSL:2

Version

ENST00000457719.1

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENST00000457719.1

Summary

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Transcript: ENST00000457719.1

Summary

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