Transcript: ENST00000452212.1 PPP1CB-DT-203

Description

PPP1CB divergent transcript [Source:HGNC Symbol;Acc:HGNC:55829]

Location

Chromosome 2: 28,708,953-28,736,205 reverse strand.

About this transcript

This transcript has 2 exons and maps to 187 oligo probes.

Gene

This transcript is a product of gene ENSG00000226833.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000757368.1	PPP1CB-DT-215	1007	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000653462.1	PPP1CB-DT-204	3541	No protein	-	lncRNA	-	-
ENST00000665023.2	PPP1CB-DT-210	2414	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000663311.2	PPP1CB-DT-209	2249	No protein	-	lncRNA	-	-
ENST00000666397.2	PPP1CB-DT-211	1870	No protein	-	lncRNA	-	-
ENST00000757372.1	PPP1CB-DT-219	1804	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000757388.1	PPP1CB-DT-235	1703	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000428036.7	PPP1CB-DT-201	1621	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000668960.2	PPP1CB-DT-212	1598	No protein	-	lncRNA	-	-
ENST00000757370.1	PPP1CB-DT-217	1571	No protein	-	lncRNA	-	-
ENST00000659356.2	PPP1CB-DT-206	1558	No protein	-	lncRNA	-	-
ENST00000757405.1	PPP1CB-DT-252	1558	No protein	-	lncRNA	-	-
ENST00000757406.1	PPP1CB-DT-253	1550	No protein	-	lncRNA	-	-
ENST00000757371.1	PPP1CB-DT-218	1546	No protein	-	lncRNA	-	-
ENST00000757389.1	PPP1CB-DT-236	1486	No protein	-	lncRNA	-	-
ENST00000757369.1	PPP1CB-DT-216	1386	No protein	-	lncRNA	-	-
ENST00000757401.1	PPP1CB-DT-248	1364	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000757400.1	PPP1CB-DT-247	1344	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000757402.1	PPP1CB-DT-249	1315	No protein	-	lncRNA	-	-
ENST00000658445.1	PPP1CB-DT-205	1301	No protein	-	lncRNA	-	-
ENST00000757421.1	PPP1CB-DT-268	1270	No protein	-	lncRNA	-	-
ENST00000757396.1	PPP1CB-DT-243	1197	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000757424.1	PPP1CB-DT-271	1179	No protein	-	lncRNA	-	-
ENST00000757397.1	PPP1CB-DT-244	1134	No protein	-	lncRNA	-	-
ENST00000757387.1	PPP1CB-DT-234	1125	No protein	-	lncRNA	-	-
ENST00000757380.1	PPP1CB-DT-227	1116	No protein	-	lncRNA	-	-
ENST00000659984.1	PPP1CB-DT-207	1091	No protein	-	lncRNA	-	-
ENST00000757403.1	PPP1CB-DT-250	1091	No protein	-	lncRNA	-	-
ENST00000757418.1	PPP1CB-DT-265	1089	No protein	-	lncRNA	-	-
ENST00000669783.1	PPP1CB-DT-213	1056	No protein	-	lncRNA	-	-
ENST00000444501.2	PPP1CB-DT-202	1053	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000757386.1	PPP1CB-DT-233	1038	No protein	-	lncRNA	-	-
ENST00000757419.1	PPP1CB-DT-266	1021	No protein	-	lncRNA	-	-
ENST00000757420.1	PPP1CB-DT-267	1015	No protein	-	lncRNA	-	-
ENST00000757417.1	PPP1CB-DT-264	997	No protein	-	lncRNA	-	-
ENST00000757379.1	PPP1CB-DT-226	916	No protein	-	lncRNA	-	-
ENST00000757374.1	PPP1CB-DT-221	912	No protein	-	lncRNA	-	-
ENST00000757390.1	PPP1CB-DT-237	912	No protein	-	lncRNA	-	-
ENST00000757393.1	PPP1CB-DT-240	911	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000757407.1	PPP1CB-DT-254	907	No protein	-	lncRNA	-	-
ENST00000757377.1	PPP1CB-DT-224	874	No protein	-	lncRNA	-	-
ENST00000757411.1	PPP1CB-DT-258	869	No protein	-	lncRNA	-	-
ENST00000757409.1	PPP1CB-DT-256	856	No protein	-	lncRNA	-	-
ENST00000757394.1	PPP1CB-DT-241	845	No protein	-	lncRNA	-	-
ENST00000757375.1	PPP1CB-DT-222	842	No protein	-	lncRNA	-	-
ENST00000757382.1	PPP1CB-DT-229	827	No protein	-	lncRNA	-	-
ENST00000757404.1	PPP1CB-DT-251	823	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000686707.2	PPP1CB-DT-214	822	No protein	-	lncRNA	-	-
ENST00000757391.1	PPP1CB-DT-238	822	No protein	-	lncRNA	-	-
ENST00000757410.1	PPP1CB-DT-257	821	No protein	-	lncRNA	-	-
ENST00000757383.1	PPP1CB-DT-230	814	No protein	-	lncRNA	-	-
ENST00000757376.1	PPP1CB-DT-223	807	No protein	-	lncRNA	-	-
ENST00000757381.1	PPP1CB-DT-228	807	No protein	-	lncRNA	-	-
ENST00000757408.1	PPP1CB-DT-255	784	No protein	-	lncRNA	-	-
ENST00000757373.1	PPP1CB-DT-220	770	No protein	-	lncRNA	-	-
ENST00000757412.1	PPP1CB-DT-259	756	No protein	-	lncRNA	-	-
ENST00000757384.1	PPP1CB-DT-231	754	No protein	-	lncRNA	-	-
ENST00000757423.1	PPP1CB-DT-270	747	No protein	-	lncRNA	-	-
ENST00000757415.1	PPP1CB-DT-262	741	No protein	-	lncRNA	-	-
ENST00000757385.1	PPP1CB-DT-232	739	No protein	-	lncRNA	-	-
ENST00000757416.1	PPP1CB-DT-263	737	No protein	-	lncRNA	-	-
ENST00000452212.1	PPP1CB-DT-203	726	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000757413.1	PPP1CB-DT-260	717	No protein	-	lncRNA	-	-
ENST00000757395.1	PPP1CB-DT-242	681	No protein	-	lncRNA	-	-
ENST00000757392.1	PPP1CB-DT-239	652	No protein	-	lncRNA	-	-
ENST00000757398.1	PPP1CB-DT-245	652	No protein	-	lncRNA	-	-
ENST00000757399.1	PPP1CB-DT-246	608	No protein	-	lncRNA	-	-
ENST00000757414.1	PPP1CB-DT-261	592	No protein	-	lncRNA	-	-
ENST00000757378.1	PPP1CB-DT-225	584	No protein	-	lncRNA	-	-
ENST00000757422.1	PPP1CB-DT-269	537	No protein	-	lncRNA	-	-
ENST00000662538.1	PPP1CB-DT-208	514	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 726 bps,

Transcript Support Level (TSL)

TSL:2

Version

ENST00000452212.1

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENST00000452212.1 PPP1CB-DT-203

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Transcript: ENST00000452212.1 PPP1CB-DT-203

Summary

About Us

Get help

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