Transcript: ENST00000448463.4

Description

novel transcript, antisense to LIPI

Location

Chromosome 21: 14,027,371-14,089,618 forward strand.

About this transcript

This transcript has 3 exons and maps to 140 oligo probes.

Gene

This transcript is a product of gene ENSG00000224905.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000769814.1	-	1090	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000769834.1	-	1566	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000769820.1	-	1477	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000428809.6	-	1465	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000448463.4	-	1432	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000769821.1	-	1431	No protein	-	lncRNA	-	-
ENST00000769817.1	-	1409	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000769843.1	-	1397	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000769816.1	-	1380	No protein	-	lncRNA	-	-
ENST00000769823.1	-	1241	No protein	-	lncRNA	-	-
ENST00000769819.1	-	1226	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000432621.6	-	1206	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000769815.1	-	1185	No protein	-	lncRNA	-	-
ENST00000769835.1	-	1062	No protein	-	lncRNA	-	-
ENST00000690295.2	-	1056	No protein	-	lncRNA	-	-
ENST00000769847.1	-	949	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000769833.1	-	941	No protein	-	lncRNA	-	-
ENST00000769832.1	-	920	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000769818.1	-	885	No protein	-	lncRNA	-	-
ENST00000653756.3	-	868	No protein	-	lncRNA	-	-
ENST00000769829.1	-	849	No protein	-	lncRNA	-	-
ENST00000769830.1	-	820	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000769828.1	-	779	No protein	-	lncRNA	-	-
ENST00000769839.1	-	776	No protein	-	lncRNA	-	-
ENST00000769848.1	-	739	No protein	-	lncRNA	-	-
ENST00000769838.1	-	727	No protein	-	lncRNA	-	-
ENST00000769824.1	-	723	No protein	-	lncRNA	-	-
ENST00000769837.1	-	714	No protein	-	lncRNA	-	-
ENST00000769846.1	-	695	No protein	-	lncRNA	-	-
ENST00000769831.1	-	692	No protein	-	lncRNA	-	-
ENST00000769841.1	-	663	No protein	-	lncRNA	-	-
ENST00000769836.1	-	630	No protein	-	lncRNA	-	-
ENST00000769825.1	-	581	No protein	-	lncRNA	-	-
ENST00000769822.1	-	556	No protein	-	lncRNA	-	-
ENST00000769842.1	-	536	No protein	-	lncRNA	-	-
ENST00000769840.1	-	514	No protein	-	lncRNA	-	-
ENST00000769827.1	-	498	No protein	-	lncRNA	-	-
ENST00000769826.1	-	427	No protein	-	lncRNA	-	-
ENST00000769850.1	-	336	No protein	-	lncRNA	-	-
ENST00000769849.1	-	330	No protein	-	lncRNA	-	-
ENST00000769845.1	-	301	No protein	-	lncRNA	-	-
ENST00000769844.1	-	290	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 1,432 bps,

Transcript Support Level (TSL)

TSL:2

Version

ENST00000448463.4

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000448463.4

Summary

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Transcript: ENST00000448463.4

Summary

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