Transcript: ENST00000446458.2 LINC02941-202

Description

long intergenic non-protein coding RNA 2941 [Source:HGNC Symbol;Acc:HGNC:55956]

Location

Chromosome 6: 140,086,677-140,093,721 forward strand.

About this transcript

This transcript has 2 exons and maps to 177 oligo probes.

Gene

This transcript is a product of gene ENSG00000236013.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000725932.1	LINC02941-219	1013	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000670422.1	LINC02941-217	1879	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000725934.1	LINC02941-221	1477	No protein	-	lncRNA	-	-
ENST00000725935.1	LINC02941-222	1427	No protein	-	lncRNA	-	-
ENST00000725937.1	LINC02941-224	1423	No protein	-	lncRNA	-	-
ENST00000725936.1	LINC02941-223	1348	No protein	-	lncRNA	-	-
ENST00000456896.6	LINC02941-203	1331	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000725941.1	LINC02941-228	1293	No protein	-	lncRNA	-	-
ENST00000663116.1	LINC02941-214	1285	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000664620.1	LINC02941-216	1172	No protein	-	lncRNA	-	-
ENST00000661724.1	LINC02941-210	1139	No protein	-	lncRNA	-	-
ENST00000662987.1	LINC02941-213	1124	No protein	-	lncRNA	-	-
ENST00000662808.1	LINC02941-211	1111	No protein	-	lncRNA	-	-
ENST00000658153.1	LINC02941-208	1085	No protein	-	lncRNA	-	-
ENST00000661527.1	LINC02941-209	1029	No protein	-	lncRNA	-	-
ENST00000655146.1	LINC02941-204	964	No protein	-	lncRNA	-	-
ENST00000725933.1	LINC02941-220	949	No protein	-	lncRNA	-	-
ENST00000663225.1	LINC02941-215	942	No protein	-	lncRNA	-	-
ENST00000687103.3	LINC02941-218	934	No protein	-	lncRNA	-	-
ENST00000657580.2	LINC02941-207	914	No protein	-	lncRNA	-	-
ENST00000662820.1	LINC02941-212	900	No protein	-	lncRNA	-	-
ENST00000656952.2	LINC02941-205	887	No protein	-	lncRNA	-	-
ENST00000418834.1	LINC02941-201	876	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000657358.1	LINC02941-206	849	No protein	-	lncRNA	-	-
ENST00000725940.1	LINC02941-227	837	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000446458.2	LINC02941-202	811	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000725942.1	LINC02941-229	808	No protein	-	lncRNA	-	-
ENST00000725939.1	LINC02941-226	759	No protein	-	lncRNA	-	-
ENST00000725938.1	LINC02941-225	658	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 811 bps,

Transcript Support Level (TSL)

TSL:2

Version

ENST00000446458.2

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000446458.2 LINC02941-202

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Transcript: ENST00000446458.2 LINC02941-202

Summary

About Us

Get help

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