Transcript: ENST00000443445.3

Description

novel transcript

Location

Chromosome 6: 3,593,490-3,624,747 reverse strand.

About this transcript

This transcript has 3 exons and maps to 153 oligo probes.

Gene

This transcript is a product of gene ENSG00000228793.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000665760.1	-	1900	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000658658.1	-	5718	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000660471.1	-	4518	No protein	-	lncRNA	-	-
ENST00000668020.1	-	3873	No protein	-	lncRNA	-	-
ENST00000659072.1	-	3098	No protein	-	lncRNA	-	-
ENST00000653557.1	-	2498	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000661957.1	-	2387	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000662974.1	-	2317	No protein	-	lncRNA	-	-
ENST00000669421.1	-	2261	No protein	-	lncRNA	-	-
ENST00000691980.1	-	2240	No protein	-	lncRNA	-	-
ENST00000665671.1	-	2229	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000656179.1	-	2146	No protein	-	lncRNA	-	-
ENST00000662672.1	-	2133	No protein	-	lncRNA	-	-
ENST00000668915.1	-	2053	No protein	-	lncRNA	-	-
ENST00000661196.1	-	2046	No protein	-	lncRNA	-	-
ENST00000660734.1	-	2042	No protein	-	lncRNA	-	-
ENST00000669021.2	-	2013	No protein	-	lncRNA	-	-
ENST00000657929.1	-	1994	No protein	-	lncRNA	-	-
ENST00000661070.2	-	1980	No protein	-	lncRNA	-	-
ENST00000659450.1	-	1963	No protein	-	lncRNA	-	-
ENST00000668872.1	-	1946	No protein	-	lncRNA	-	-
ENST00000660793.1	-	1935	No protein	-	lncRNA	-	-
ENST00000655990.1	-	1924	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000666680.3	-	1890	No protein	-	lncRNA	-	-
ENST00000670704.1	-	1879	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000661016.1	-	1870	No protein	-	lncRNA	-	-
ENST00000667255.1	-	1866	No protein	-	lncRNA	-	-
ENST00000655328.1	-	1833	No protein	-	lncRNA	-	-
ENST00000667691.2	-	1802	No protein	-	lncRNA	-	-
ENST00000669829.1	-	1762	No protein	-	lncRNA	-	-
ENST00000817314.1	-	1650	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000817311.1	-	1612	No protein	-	lncRNA	-	-
ENST00000653626.1	-	1569	No protein	-	lncRNA	-	-
ENST00000652961.1	-	1554	No protein	-	lncRNA	-	-
ENST00000443445.3	-	1546	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000817312.1	-	1546	No protein	-	lncRNA	-	-
ENST00000667419.1	-	1520	No protein	-	lncRNA	-	-
ENST00000663773.1	-	1493	No protein	-	lncRNA	-	-
ENST00000689564.2	-	1271	No protein	-	lncRNA	-	-
ENST00000817318.1	-	990	No protein	-	lncRNA	-	-
ENST00000656112.1	-	970	No protein	-	lncRNA	-	-
ENST00000817313.1	-	893	No protein	-	lncRNA	-	-
ENST00000817317.1	-	716	No protein	-	lncRNA	-	-
ENST00000817316.1	-	606	No protein	-	lncRNA	-	-
ENST00000817315.1	-	584	No protein	-	lncRNA	-	-
ENST00000817319.1	-	558	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 1,546 bps,

Transcript Support Level (TSL)

TSL:3

Version

ENST00000443445.3

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000443445.3

Summary

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Transcript: ENST00000443445.3

Summary

About Us

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