Transcript: ENST00000442841.3 LINC02931-201

Description

long intergenic non-protein coding RNA 2931 [Source:HGNC Symbol;Acc:HGNC:55853]

Location

Chromosome X: 137,560,669-137,564,903 reverse strand.

About this transcript

This transcript has 2 exons and maps to 115 oligo probes.

Gene

This transcript is a product of gene ENSG00000224765.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000786828.1	LINC02931-213	1476	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000786829.1	LINC02931-214	1855	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000786830.1	LINC02931-215	1651	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000786835.1	LINC02931-220	1365	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000786836.1	LINC02931-221	1349	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000786832.1	LINC02931-217	1265	No protein	-	lncRNA	-	-
ENST00000786834.1	LINC02931-219	1105	No protein	-	lncRNA	-	-
ENST00000442841.3	LINC02931-201	1102	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000786840.1	LINC02931-225	999	No protein	-	lncRNA	-	-
ENST00000786839.1	LINC02931-224	996	No protein	-	lncRNA	-	-
ENST00000786831.1	LINC02931-216	965	No protein	-	lncRNA	-	-
ENST00000786833.1	LINC02931-218	865	No protein	-	lncRNA	-	-
ENST00000786838.1	LINC02931-223	824	No protein	-	lncRNA	-	-
ENST00000786824.1	LINC02931-209	729	No protein	-	lncRNA	-	-
ENST00000786841.1	LINC02931-226	594	No protein	-	lncRNA	-	-
ENST00000786837.1	LINC02931-222	587	No protein	-	lncRNA	-	-
ENST00000456631.2	LINC02931-202	529	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000786822.1	LINC02931-207	453	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000690456.1	LINC02931-204	422	No protein	-	lncRNA	-	-
ENST00000786820.1	LINC02931-205	409	No protein	-	lncRNA	-	-
ENST00000786826.1	LINC02931-211	382	No protein	-	lncRNA	-	-
ENST00000786821.1	LINC02931-206	315	No protein	-	lncRNA	-	-
ENST00000786827.1	LINC02931-212	303	No protein	-	lncRNA	-	-
ENST00000689992.2	LINC02931-203	275	No protein	-	lncRNA	-	-
ENST00000786825.1	LINC02931-210	273	No protein	-	lncRNA	-	-
ENST00000786823.1	LINC02931-208	268	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 1,102 bps,

Transcript Support Level (TSL)

TSL:2

Version

ENST00000442841.3

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000442841.3 LINC02931-201

Summary

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Transcript: ENST00000442841.3 LINC02931-201

Summary

About Us

Get help

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