Transcript: ENST00000437648.1

Description

novel transcript

Location

Chromosome 6: 14,976,788-15,090,003 reverse strand.

About this transcript

This transcript has 4 exons and maps to 185 oligo probes.

Gene

This transcript is a product of gene ENSG00000234261.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000629853.3	-	1499	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000689305.1	-	2239	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000656344.1	-	1915	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000792377.1	-	1860	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000656468.1	-	1673	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000702363.1	-	1459	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000792374.1	-	1399	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000792388.1	-	1377	No protein	-	lncRNA	-	-
ENST00000792389.1	-	1365	No protein	-	lncRNA	-	-
ENST00000730148.1	-	1347	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000729740.1	-	1309	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000729738.1	-	1251	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000729812.1	-	1195	No protein	-	lncRNA	-	-
ENST00000659197.1	-	1194	No protein	-	lncRNA	-	-
ENST00000792378.1	-	1171	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000792375.1	-	1058	No protein	-	lncRNA	-	-
ENST00000702111.1	-	1049	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000653525.1	-	1041	No protein	-	lncRNA	-	-
ENST00000656807.1	-	1033	No protein	-	lncRNA	-	-
ENST00000792386.1	-	1028	No protein	-	lncRNA	-	-
ENST00000792387.1	-	1022	No protein	-	lncRNA	-	-
ENST00000437648.1	-	1017	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000729745.1	-	959	No protein	-	lncRNA	-	-
ENST00000792376.1	-	921	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000792380.1	-	900	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000792379.1	-	868	No protein	-	lncRNA	-	-
ENST00000729739.1	-	814	No protein	-	lncRNA	-	-
ENST00000792385.1	-	802	No protein	-	lncRNA	-	-
ENST00000792392.1	-	757	No protein	-	lncRNA	-	-
ENST00000792390.1	-	755	No protein	-	lncRNA	-	-
ENST00000729741.1	-	591	No protein	-	lncRNA	-	-
ENST00000792381.1	-	577	No protein	-	lncRNA	-	-
ENST00000792391.1	-	549	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000729742.1	-	495	No protein	-	lncRNA	-	-
ENST00000729748.1	-	454	No protein	-	lncRNA	-	-
ENST00000729746.1	-	448	No protein	-	lncRNA	-	-
ENST00000729744.1	-	443	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000729747.1	-	416	No protein	-	lncRNA	-	-
ENST00000729743.1	-	393	No protein	-	lncRNA	-	-
ENST00000792383.1	-	378	No protein	-	lncRNA	-	-
ENST00000792382.1	-	357	No protein	-	lncRNA	-	-
ENST00000792384.1	-	319	No protein	-	lncRNA	-	-
ENST00000414740.2	-	146	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 1,017 bps,

Transcript Support Level (TSL)

TSL:5

Version

ENST00000437648.1

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENST00000437648.1

Summary

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Transcript: ENST00000437648.1

Summary

About Us

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