Transcript: ENST00000435641.5 LY86-AS1-202

Description

LY86 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:26593]

Gene Synonyms

FLJ33708, LY86-AS, LY86AS

Location

Chromosome 6: 6,360,591-6,622,695 reverse strand.

About this transcript

This transcript has 7 exons and maps to 321 oligo probes.

Gene

This transcript is a product of gene ENSG00000216863.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000753058.1	LY86-AS1-214	2442	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000658580.1	LY86-AS1-209	3098	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000753074.1	LY86-AS1-230	3037	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000607278.2	LY86-AS1-206	2972	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000653438.1	LY86-AS1-207	2957	No protein	-	lncRNA	-	-
ENST00000435641.5	LY86-AS1-202	2819	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000701209.1	LY86-AS1-213	2554	No protein	-	lncRNA	-	-
ENST00000665459.1	LY86-AS1-211	2526	No protein	-	lncRNA	-	-
ENST00000753069.1	LY86-AS1-225	2339	No protein	-	lncRNA	-	-
ENST00000753067.1	LY86-AS1-223	2280	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000753064.1	LY86-AS1-220	2201	No protein	-	lncRNA	-	-
ENST00000753060.1	LY86-AS1-216	2149	No protein	-	lncRNA	-	-
ENST00000669477.1	LY86-AS1-212	1960	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000753066.1	LY86-AS1-222	1953	No protein	-	lncRNA	-	-
ENST00000429345.5	LY86-AS1-201	1941	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000753062.1	LY86-AS1-218	1897	No protein	-	lncRNA	-	-
ENST00000753061.1	LY86-AS1-217	1890	No protein	-	lncRNA	-	-
ENST00000753063.1	LY86-AS1-219	1790	No protein	-	lncRNA	-	-
ENST00000753068.1	LY86-AS1-224	1751	No protein	-	lncRNA	-	-
ENST00000753065.1	LY86-AS1-221	1710	No protein	-	lncRNA	-	-
ENST00000753059.1	LY86-AS1-215	1503	No protein	-	lncRNA	-	-
ENST00000753076.1	LY86-AS1-232	1435	No protein	-	lncRNA	-	-
ENST00000753075.1	LY86-AS1-231	1363	No protein	-	lncRNA	-	-
ENST00000655679.1	LY86-AS1-208	1316	No protein	-	lncRNA	-	-
ENST00000753070.1	LY86-AS1-226	1144	No protein	-	lncRNA	-	-
ENST00000753072.1	LY86-AS1-228	1080	No protein	-	lncRNA	-	-
ENST00000447858.1	LY86-AS1-203	938	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000753071.1	LY86-AS1-227	923	No protein	-	lncRNA	-	-
ENST00000753073.1	LY86-AS1-229	905	No protein	-	lncRNA	-	-
ENST00000753078.1	LY86-AS1-234	889	No protein	-	lncRNA	-	-
ENST00000661991.1	LY86-AS1-210	809	No protein	-	lncRNA	-	-
ENST00000753077.1	LY86-AS1-233	747	No protein	-	lncRNA	-	-
ENST00000753079.1	LY86-AS1-235	735	No protein	-	lncRNA	-	-
ENST00000606044.1	LY86-AS1-204	572	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000606992.1	LY86-AS1-205	545	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,

Summary

Statistics

Exons: 7, Coding exons: 0, Transcript length: 2,819 bps,

Transcript Support Level (TSL)

TSL:2

Version

ENST00000435641.5

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000435641.5 LY86-AS1-202

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Transcript: ENST00000435641.5 LY86-AS1-202

Summary

About Us

Get help

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