Transcript: ENST00000433975.5 HLA-DRB1-219

Description

major histocompatibility complex, class II, DR beta 1 [Source:HGNC Symbol;Acc:HGNC:4948]

Gene Synonyms

HLA-DR1B

Location

Scaffold HSCHR6_MHC_MANN_CTG1: 3,991,308-4,023,043 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 15 domains and features and maps to 549 oligo probes.

Gene

This transcript is a product of gene ENSG00000229074.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000437784.6	HLA-DRB1-220	1235	266aa	ENSP00000405960.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D7RIG5	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENST00000433975.5	HLA-DRB1-219	749	250aa	ENSP00000392880.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A140T958	-	TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA, 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 749 bps, Translation length: 250 residues

Transcript Support Level (TSL)

TSL:NA

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENST00000433975.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENST00000433975.5 HLA-DRB1-219

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Transcript: ENST00000433975.5 HLA-DRB1-219

Summary

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