Transcript: ENST00000430847.4 LINC01833-201

Description

long intergenic non-protein coding RNA 1833 [Source:HGNC Symbol;Acc:HGNC:52644]

Gene Synonyms

RP11-89-K21.1

Location

Chromosome 2: 44,929,975-44,935,996 reverse strand.

About this transcript

This transcript has 2 exons and maps to 199 oligo probes.

Gene

This transcript is a product of gene ENSG00000259439.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000760488.1	LINC01833-207	1193	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000437916.2	LINC01833-203	2880	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000432125.3	LINC01833-202	2755	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000760498.1	LINC01833-217	1813	No protein	-	lncRNA	-	-
ENST00000760489.1	LINC01833-208	1610	No protein	-	lncRNA	-	-
ENST00000760494.1	LINC01833-213	1459	No protein	-	lncRNA	-	-
ENST00000760507.1	LINC01833-226	1405	No protein	-	lncRNA	-	-
ENST00000760493.1	LINC01833-212	1378	No protein	-	lncRNA	-	-
ENST00000760496.1	LINC01833-215	1243	No protein	-	lncRNA	-	-
ENST00000760497.1	LINC01833-216	1196	No protein	-	lncRNA	-	-
ENST00000560399.2	LINC01833-205	1181	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000760505.1	LINC01833-224	1173	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000760502.1	LINC01833-221	1105	No protein	-	lncRNA	-	-
ENST00000685287.2	LINC01833-206	1093	No protein	-	lncRNA	-	-
ENST00000760495.1	LINC01833-214	996	No protein	-	lncRNA	-	-
ENST00000430847.4	LINC01833-201	990	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000444871.4	LINC01833-204	927	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000760509.1	LINC01833-228	774	No protein	-	lncRNA	-	-
ENST00000760504.1	LINC01833-223	735	No protein	-	lncRNA	-	-
ENST00000760506.1	LINC01833-225	581	No protein	-	lncRNA	-	-
ENST00000760500.1	LINC01833-219	579	No protein	-	lncRNA	-	-
ENST00000760510.1	LINC01833-229	562	No protein	-	lncRNA	-	-
ENST00000760492.1	LINC01833-211	497	No protein	-	lncRNA	-	-
ENST00000760503.1	LINC01833-222	486	No protein	-	lncRNA	-	-
ENST00000760508.1	LINC01833-227	467	No protein	-	lncRNA	-	-
ENST00000760501.1	LINC01833-220	434	No protein	-	lncRNA	-	-
ENST00000760490.1	LINC01833-209	417	No protein	-	lncRNA	-	-
ENST00000760499.1	LINC01833-218	393	No protein	-	lncRNA	-	-
ENST00000760491.1	LINC01833-210	291	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 990 bps,

Transcript Support Level (TSL)

TSL:2

Version

ENST00000430847.4

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000430847.4 LINC01833-201

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Transcript: ENST00000430847.4 LINC01833-201

Summary

About Us

Get help

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