Transcript: ENST00000425529.8

Description

novel transcript

Location

Chromosome 5: 70,462,225-70,479,554 forward strand.

About this transcript

This transcript has 6 exons and maps to 563 oligo probes.

Gene

This transcript is a product of gene ENSG00000291221.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000769676.1	-	698	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000769680.1	-	1859	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000769694.1	-	1602	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000769696.1	-	1371	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000769678.1	-	1153	No protein	-	lncRNA	-	-
ENST00000504546.6	-	1092	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000425529.8	-	1016	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000769691.1	-	908	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000769692.1	-	904	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000769693.1	-	895	No protein	-	lncRNA	-	-
ENST00000769688.1	-	854	No protein	-	lncRNA	-	-
ENST00000769686.1	-	840	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000769685.1	-	821	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000769684.1	-	789	No protein	-	lncRNA	-	-
ENST00000769681.1	-	759	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000769689.1	-	725	No protein	-	lncRNA	-	-
ENST00000769679.1	-	703	No protein	-	lncRNA	-	-
ENST00000769690.1	-	688	No protein	-	lncRNA	-	-
ENST00000769682.1	-	677	No protein	-	lncRNA	-	-
ENST00000769677.1	-	672	No protein	-	lncRNA	-	-
ENST00000769683.1	-	571	No protein	-	lncRNA	-	-
ENST00000769687.1	-	569	No protein	-	lncRNA	-	-
ENST00000769695.1	-	318	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 1,016 bps,

Transcript Support Level (TSL)

TSL:3

Version

ENST00000425529.8

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Annotation Attributes

overlaps pseudogene [Definitions]

Transcript: ENST00000425529.8

Summary

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Transcript: ENST00000425529.8

Summary

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