Transcript: ENST00000423149.1

Description

novel transcript

Location

Chromosome 6: 11,487,226-11,515,710 forward strand.

About this transcript

This transcript has 5 exons and maps to 217 oligo probes.

Gene

This transcript is a product of gene ENSG00000233656.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000718204.1	-	967	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000665550.1	-	1268	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000805891.1	-	1038	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000805896.1	-	999	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000718206.1	-	961	No protein	-	lncRNA	-	-
ENST00000658564.1	-	952	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000805897.1	-	925	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000665168.1	-	908	No protein	-	lncRNA	-	-
ENST00000805887.1	-	876	No protein	-	lncRNA	-	-
ENST00000419796.3	-	811	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000655515.1	-	797	No protein	-	lncRNA	-	-
ENST00000805894.1	-	776	No protein	-	lncRNA	-	-
ENST00000805895.1	-	771	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000667074.2	-	764	No protein	-	lncRNA	-	-
ENST00000669663.1	-	744	No protein	-	lncRNA	-	-
ENST00000805893.1	-	702	No protein	-	lncRNA	-	-
ENST00000805888.1	-	690	No protein	-	lncRNA	-	-
ENST00000423149.1	-	686	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000805899.1	-	681	No protein	-	lncRNA	-	-
ENST00000805886.1	-	645	No protein	-	lncRNA	-	-
ENST00000805890.1	-	578	No protein	-	lncRNA	-	-
ENST00000718205.1	-	572	No protein	-	lncRNA	-	-
ENST00000805892.1	-	531	No protein	-	lncRNA	-	-
ENST00000805898.1	-	500	No protein	-	lncRNA	-	-
ENST00000805889.1	-	373	No protein	-	lncRNA	-	-
ENST00000805901.1	-	347	No protein	-	lncRNA	-	-
ENST00000805902.1	-	324	No protein	-	lncRNA	-	-
ENST00000805900.1	-	252	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 686 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENST00000423149.1

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENST00000423149.1

Summary

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Transcript: ENST00000423149.1

Summary

About Us

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