Transcript: ENST00000422971.2 LINC01589-201

Description

long intergenic non-protein coding RNA 1589 [Source:HGNC Symbol;Acc:HGNC:51520]

Gene Synonyms

CTA-941F9.9, TCONS_00029353

Location

Chromosome 22: 45,604,432-45,605,660 reverse strand.

About this transcript

This transcript has 2 exons and maps to 129 oligo probes.

Gene

This transcript is a product of gene ENSG00000238120.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000793630.1	LINC01589-203	670	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000793636.1	LINC01589-209	1661	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000793643.1	LINC01589-216	1324	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000793644.1	LINC01589-217	912	No protein	-	lncRNA	-	-
ENST00000793632.1	LINC01589-205	746	No protein	-	lncRNA	-	-
ENST00000793637.1	LINC01589-210	703	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000793645.1	LINC01589-218	653	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000793638.1	LINC01589-211	631	No protein	-	lncRNA	-	-
ENST00000793634.1	LINC01589-207	606	No protein	-	lncRNA	-	-
ENST00000793633.1	LINC01589-206	605	No protein	-	lncRNA	-	-
ENST00000793646.1	LINC01589-219	603	No protein	-	lncRNA	-	-
ENST00000422971.2	LINC01589-201	587	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000793647.1	LINC01589-220	577	No protein	-	lncRNA	-	-
ENST00000701502.1	LINC01589-202	537	No protein	-	lncRNA	-	-
ENST00000793648.1	LINC01589-221	528	No protein	-	lncRNA	-	-
ENST00000793640.1	LINC01589-213	521	No protein	-	lncRNA	-	-
ENST00000793642.1	LINC01589-215	497	No protein	-	lncRNA	-	-
ENST00000793649.1	LINC01589-222	496	No protein	-	lncRNA	-	-
ENST00000793631.1	LINC01589-204	484	No protein	-	lncRNA	-	-
ENST00000793635.1	LINC01589-208	481	No protein	-	lncRNA	-	-
ENST00000793639.1	LINC01589-212	447	No protein	-	lncRNA	-	-
ENST00000793650.1	LINC01589-223	412	No protein	-	lncRNA	-	-
ENST00000793651.1	LINC01589-224	409	No protein	-	lncRNA	-	-
ENST00000793641.1	LINC01589-214	405	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 587 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENST00000422971.2

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000422971.2 LINC01589-201

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENST00000422971.2 LINC01589-201

Summary

About Us

Get help

Our sister sites

Follow us