Transcript: ENST00000416599.5 MRPS31P5-202

Description

mitochondrial ribosomal protein S31 pseudogene 5 [Source:NCBI gene (formerly Entrezgene);Acc:100887750]

Gene Synonyms

MRPS31P3

Location

Chromosome 13: 52,167,709-52,194,465 reverse strand.

About this transcript

This transcript has 9 exons and maps to 963 oligo probes.

Gene

This transcript is a product of gene ENSG00000291010.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000833352.1	MRPS31P5-206	2865	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000416599.5	MRPS31P5-202	3494	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000833356.1	MRPS31P5-210	2865	No protein	-	lncRNA	-	-
ENST00000833353.1	MRPS31P5-207	2743	No protein	-	lncRNA	-	-
ENST00000833357.1	MRPS31P5-211	2625	No protein	-	lncRNA	-	-
ENST00000833354.1	MRPS31P5-208	2599	No protein	-	lncRNA	-	-
ENST00000833355.1	MRPS31P5-209	2497	No protein	-	lncRNA	-	-
ENST00000833358.1	MRPS31P5-212	2421	No protein	-	lncRNA	-	-
ENST00000833365.1	MRPS31P5-219	2195	No protein	-	lncRNA	-	-
ENST00000833359.1	MRPS31P5-213	2089	No protein	-	lncRNA	-	-
ENST00000833372.1	MRPS31P5-226	1911	No protein	-	lncRNA	-	-
ENST00000833362.1	MRPS31P5-216	1905	No protein	-	lncRNA	-	-
ENST00000833366.1	MRPS31P5-220	1863	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000833363.1	MRPS31P5-217	1857	No protein	-	lncRNA	-	-
ENST00000833360.1	MRPS31P5-214	1829	No protein	-	lncRNA	-	-
ENST00000833361.1	MRPS31P5-215	1771	No protein	-	lncRNA	-	-
ENST00000833364.1	MRPS31P5-218	1747	No protein	-	lncRNA	-	-
ENST00000833368.1	MRPS31P5-222	1647	No protein	-	lncRNA	-	-
ENST00000833367.1	MRPS31P5-221	1510	No protein	-	lncRNA	-	-
ENST00000833371.1	MRPS31P5-225	1329	No protein	-	lncRNA	-	-
ENST00000833369.1	MRPS31P5-223	1267	No protein	-	lncRNA	-	-
ENST00000833380.1	MRPS31P5-234	1231	No protein	-	lncRNA	-	-
ENST00000833370.1	MRPS31P5-224	1180	No protein	-	lncRNA	-	-
ENST00000833378.1	MRPS31P5-232	1147	No protein	-	lncRNA	-	-
ENST00000833374.1	MRPS31P5-228	747	No protein	-	lncRNA	-	-
ENST00000833376.1	MRPS31P5-230	569	No protein	-	lncRNA	-	-
ENST00000606619.1	MRPS31P5-203	564	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000606974.5	MRPS31P5-204	551	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000833373.1	MRPS31P5-227	501	No protein	-	lncRNA	-	-
ENST00000833375.1	MRPS31P5-229	498	No protein	-	lncRNA	-	-
ENST00000607588.1	MRPS31P5-205	485	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000833377.1	MRPS31P5-231	374	No protein	-	lncRNA	-	-
ENST00000833381.1	MRPS31P5-235	295	No protein	-	lncRNA	-	-
ENST00000833379.1	MRPS31P5-233	270	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 9, Coding exons: 0, Transcript length: 3,494 bps,

Transcript Support Level (TSL)

TSL:2

Version

ENST00000416599.5

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

overlaps pseudogene [Definitions]

QC splicing correct

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000416599.5 MRPS31P5-202

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Transcript: ENST00000416599.5 MRPS31P5-202

Summary

About Us

Get help

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