Transcript: ENST00000409178.5 C10orf55-201

Description

chromosome 10 putative open reading frame 55 [Source:HGNC Symbol;Acc:HGNC:31008]

Gene Synonyms

BA417O11.3

Location

Chromosome 10: 73,909,969-73,922,777 reverse strand.

About this transcript

This transcript has 5 exons and maps to 265 oligo probes.

Gene

This transcript is a product of gene ENSG00000222047.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000721915.1	C10orf55-202	616	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000409178.5	C10orf55-201	2513	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000721917.1	C10orf55-204	862	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000721921.1	C10orf55-208	737	No protein	-	lncRNA	-	-
ENST00000721923.1	C10orf55-210	714	No protein	-	lncRNA	-	-
ENST00000721922.1	C10orf55-209	689	No protein	-	lncRNA	-	-
ENST00000721919.1	C10orf55-206	687	No protein	-	lncRNA	-	-
ENST00000721920.1	C10orf55-207	684	No protein	-	lncRNA	-	-
ENST00000721918.1	C10orf55-205	626	No protein	-	lncRNA	-	-
ENST00000721924.1	C10orf55-211	507	No protein	-	lncRNA	-	-
ENST00000721916.1	C10orf55-203	463	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 2,513 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENST00000409178.5

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000409178.5 C10orf55-201

Summary

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Transcript: ENST00000409178.5 C10orf55-201

Summary

About Us

Get help

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