Transcript: ENST00000381680.8 CATSPER2P1-202

Description

CATSPER2 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:31054]

Gene Synonyms

CATSPER2B

Location

Chromosome 15: 43,735,934-43,746,307 reverse strand.

About this transcript

This transcript has 4 exons and maps to 408 oligo probes.

Gene

This transcript is a product of gene ENSG00000291053.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000828134.1	CATSPER2P1-216	1415	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000828135.1	CATSPER2P1-217	1855	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000689243.2	CATSPER2P1-209	1683	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000416302.7	CATSPER2P1-203	1666	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000381680.8	CATSPER2P1-202	1658	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000828136.1	CATSPER2P1-218	1590	No protein	-	lncRNA	-	-
ENST00000692045.3	CATSPER2P1-212	1524	No protein	-	lncRNA	-	-
ENST00000429276.2	CATSPER2P1-204	1476	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000446479.2	CATSPER2P1-205	1373	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000828138.1	CATSPER2P1-220	1229	No protein	-	lncRNA	-	-
ENST00000701203.2	CATSPER2P1-214	976	No protein	-	lncRNA	-	-
ENST00000687891.2	CATSPER2P1-206	922	No protein	-	lncRNA	-	-
ENST00000828137.1	CATSPER2P1-219	838	No protein	-	lncRNA	-	-
ENST00000687921.3	CATSPER2P1-207	821	No protein	-	lncRNA	-	-
ENST00000828139.1	CATSPER2P1-221	812	No protein	-	lncRNA	-	-
ENST00000828143.1	CATSPER2P1-225	810	No protein	-	lncRNA	-	-
ENST00000701386.1	CATSPER2P1-215	802	No protein	-	lncRNA	-	-
ENST00000691160.3	CATSPER2P1-211	793	No protein	-	lncRNA	-	-
ENST00000689686.3	CATSPER2P1-210	703	No protein	-	lncRNA	-	-
ENST00000687929.2	CATSPER2P1-208	700	No protein	-	lncRNA	-	-
ENST00000828141.1	CATSPER2P1-223	682	No protein	-	lncRNA	-	-
ENST00000828142.1	CATSPER2P1-224	578	No protein	-	lncRNA	-	-
ENST00000828140.1	CATSPER2P1-222	574	No protein	-	lncRNA	-	-
ENST00000700962.2	CATSPER2P1-213	563	No protein	-	lncRNA	-	-
ENST00000828144.1	CATSPER2P1-226	547	No protein	-	lncRNA	-	-
ENST00000828145.1	CATSPER2P1-227	515	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 1,658 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENST00000381680.8

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Annotation Attributes

overlaps pseudogene [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000381680.8 CATSPER2P1-202

Summary

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Transcript: ENST00000381680.8 CATSPER2P1-202

Summary

About Us

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