Transcript: ENST00000379677.3 LINC01460-201

Description

long intergenic non-protein coding RNA 1460 [Source:HGNC Symbol;Acc:HGNC:50858]

Location

Chromosome 2: 27,705,786-27,715,779 reverse strand.

About this transcript

This transcript has 2 exons and maps to 106 oligo probes.

Gene

This transcript is a product of gene ENSG00000205334.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000687803.2	LINC01460-204	2996	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000379677.3	LINC01460-201	2907	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000813602.1	LINC01460-212	1477	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000702883.2	LINC01460-209	1457	No protein	-	lncRNA	-	-
ENST00000691312.3	LINC01460-207	1418	No protein	-	lncRNA	-	-
ENST00000813607.1	LINC01460-217	1399	No protein	-	lncRNA	-	-
ENST00000689220.2	LINC01460-205	1374	No protein	-	lncRNA	-	-
ENST00000685646.1	LINC01460-202	1316	No protein	-	lncRNA	-	-
ENST00000813606.1	LINC01460-216	1300	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000689224.1	LINC01460-206	1286	No protein	-	lncRNA	-	-
ENST00000813609.1	LINC01460-219	1279	No protein	-	lncRNA	-	-
ENST00000813601.1	LINC01460-211	1262	No protein	-	lncRNA	-	-
ENST00000691814.1	LINC01460-208	1211	No protein	-	lncRNA	-	-
ENST00000813605.1	LINC01460-215	1206	No protein	-	lncRNA	-	-
ENST00000813615.1	LINC01460-225	1081	No protein	-	lncRNA	-	-
ENST00000813613.1	LINC01460-223	1041	No protein	-	lncRNA	-	-
ENST00000813608.1	LINC01460-218	796	No protein	-	lncRNA	-	-
ENST00000813603.1	LINC01460-213	761	No protein	-	lncRNA	-	-
ENST00000813616.1	LINC01460-226	740	No protein	-	lncRNA	-	-
ENST00000813600.1	LINC01460-210	680	No protein	-	lncRNA	-	-
ENST00000813604.1	LINC01460-214	610	No protein	-	lncRNA	-	-
ENST00000813610.1	LINC01460-220	604	No protein	-	lncRNA	-	-
ENST00000687139.1	LINC01460-203	599	No protein	-	lncRNA	-	-
ENST00000813611.1	LINC01460-221	482	No protein	-	lncRNA	-	-
ENST00000813617.1	LINC01460-227	470	No protein	-	lncRNA	-	-
ENST00000813614.1	LINC01460-224	467	No protein	-	lncRNA	-	-
ENST00000813612.1	LINC01460-222	448	No protein	-	lncRNA	-	-
ENST00000813618.1	LINC01460-228	393	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 2,907 bps,

Transcript Support Level (TSL)

TSL:2

Version

ENST00000379677.3

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000379677.3 LINC01460-201

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Transcript: ENST00000379677.3 LINC01460-201

Summary

About Us

Get help

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