Transcript: ENST00000458070.1

Description

novel transcript

Location

Chromosome 1: 177,393,679-177,597,709 reverse strand.

About this transcript

This transcript has 4 exons, is associated with 87940 variant alleles and maps to 251 oligo probes.

Gene

This transcript is a product of gene ENSG00000227579.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000664407.1	-	1444	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000663166.1	-	1766	No protein	-	lncRNA	-	-
ENST00000670762.1	-	1748	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000663978.1	-	1575	No protein	-	lncRNA	-	-
ENST00000671550.1	-	1541	No protein	-	lncRNA	-	-
ENST00000438575.6	-	1415	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000670728.1	-	1386	No protein	-	lncRNA	-	-
ENST00000654501.1	-	1291	No protein	-	lncRNA	-	-
ENST00000670676.1	-	1259	No protein	-	lncRNA	-	-
ENST00000660865.1	-	1223	No protein	-	lncRNA	-	-
ENST00000670039.1	-	901	No protein	-	lncRNA	-	-
ENST00000458070.1	-	546	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 546 bps,

Transcript Support Level (TSL)

TSL:5

Version

ENST00000458070.1

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

QC splicing correct [Definitions]

Transcript: ENST00000458070.1

Summary

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Transcript: ENST00000458070.1

Summary

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