Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: LINC01902 ENSG00000283503

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Description

long intergenic non-protein coding RNA 1902 [Source:HGNC Symbol;Acc:HGNC:52721]

Location

Chromosome 18: 39,799,745-39,896,298 forward strand.

GRCh38:CM000680.2

About this gene

This gene has 15 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	RefSeq Match	Flags
ENST00000659647.2	LINC01902-204	1902	No protein	-	lncRNA		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000636467.3	LINC01902-201	7863	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000637369.1	LINC01902-203	7356	No protein	-	lncRNA		-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000636983.1	LINC01902-202	4607	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000663227.1	LINC01902-206	2606	No protein	-	lncRNA		-	-
ENST00000668049.1	LINC01902-207	2407	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000660142.1	LINC01902-205	2081	No protein	-	lncRNA		-	-
ENST00000793337.1	LINC01902-211	1323	No protein	-	lncRNA		-	-
ENST00000793338.1	LINC01902-212	1213	No protein	-	lncRNA		-	-
ENST00000700790.2	LINC01902-209	1206	No protein	-	lncRNA		-	-
ENST00000793336.1	LINC01902-210	855	No protein	-	lncRNA		-	-
ENST00000693193.2	LINC01902-208	815	No protein	-	lncRNA		-	-
ENST00000793341.1	LINC01902-215	769	No protein	-	lncRNA		-	-
ENST00000793340.1	LINC01902-214	758	No protein	-	lncRNA		-	-
ENST00000793339.1	LINC01902-213	727	No protein	-	lncRNA		-	-

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Summary

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