Gene: HPAT5 ENSG00000280707

Description

human pluripotency-associated transcript 5 [Source:NCBI gene (formerly Entrezgene);Acc:112590798]

Location

Chromosome 6: 167,220,484-167,268,980 forward strand.

GRCh38:CM000668.2

About this gene

This gene has 72 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000761082.1	HPAT5-207	2622	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000761083.1	HPAT5-208	2217	No protein	-	lncRNA	-	-
ENST00000761125.1	HPAT5-250	2117	No protein	-	lncRNA	-	-
ENST00000761127.1	HPAT5-252	1460	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000761131.1	HPAT5-256	1133	No protein	-	lncRNA	-	-
ENST00000625787.4	HPAT5-202	991	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000761105.1	HPAT5-230	968	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000761099.1	HPAT5-224	917	No protein	-	lncRNA	-	-
ENST00000761104.1	HPAT5-229	900	No protein	-	lncRNA	-	-
ENST00000761124.1	HPAT5-249	887	No protein	-	lncRNA	-	-
ENST00000761128.1	HPAT5-253	879	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000761133.1	HPAT5-258	833	No protein	-	lncRNA	-	-
ENST00000761107.1	HPAT5-232	776	No protein	-	lncRNA	-	-
ENST00000761101.1	HPAT5-226	774	No protein	-	lncRNA	-	-
ENST00000761100.1	HPAT5-225	751	No protein	-	lncRNA	-	-
ENST00000691081.2	HPAT5-206	746	No protein	-	lncRNA	-	-
ENST00000761116.1	HPAT5-241	746	No protein	-	lncRNA	-	-
ENST00000761143.1	HPAT5-268	736	No protein	-	lncRNA	-	-
ENST00000761118.1	HPAT5-243	726	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000761126.1	HPAT5-251	720	No protein	-	lncRNA	-	-
ENST00000761098.1	HPAT5-223	709	No protein	-	lncRNA	-	-
ENST00000761134.1	HPAT5-259	708	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000761129.1	HPAT5-254	700	No protein	-	lncRNA	-	-
ENST00000761106.1	HPAT5-231	693	No protein	-	lncRNA	-	-
ENST00000761146.1	HPAT5-271	662	No protein	-	lncRNA	-	-
ENST00000626424.3	HPAT5-203	661	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000761132.1	HPAT5-257	657	No protein	-	lncRNA	-	-
ENST00000761117.1	HPAT5-242	650	No protein	-	lncRNA	-	-
ENST00000761140.1	HPAT5-265	647	No protein	-	lncRNA	-	-
ENST00000761144.1	HPAT5-269	643	No protein	-	lncRNA	-	-
ENST00000761142.1	HPAT5-267	622	No protein	-	lncRNA	-	-
ENST00000685238.2	HPAT5-205	610	No protein	-	lncRNA	-	-
ENST00000761112.1	HPAT5-237	605	No protein	-	lncRNA	-	-
ENST00000761109.1	HPAT5-234	604	No protein	-	lncRNA	-	-
ENST00000761097.1	HPAT5-222	603	No protein	-	lncRNA	-	-
ENST00000761145.1	HPAT5-270	588	No protein	-	lncRNA	-	-
ENST00000761103.1	HPAT5-228	587	No protein	-	lncRNA	-	-
ENST00000628362.2	HPAT5-204	582	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000761139.1	HPAT5-264	573	No protein	-	lncRNA	-	-
ENST00000761123.1	HPAT5-248	569	No protein	-	lncRNA	-	-
ENST00000761136.1	HPAT5-261	569	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000761115.1	HPAT5-240	565	No protein	-	lncRNA	-	-
ENST00000761102.1	HPAT5-227	548	No protein	-	lncRNA	-	-
ENST00000761137.1	HPAT5-262	544	No protein	-	lncRNA	-	-
ENST00000761092.1	HPAT5-217	543	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000761138.1	HPAT5-263	542	No protein	-	lncRNA	-	-
ENST00000761147.1	HPAT5-272	537	No protein	-	lncRNA	-	-
ENST00000761141.1	HPAT5-266	536	No protein	-	lncRNA	-	-
ENST00000761094.1	HPAT5-219	526	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000761091.1	HPAT5-216	523	No protein	-	lncRNA	-	-
ENST00000761121.1	HPAT5-246	519	No protein	-	lncRNA	-	-
ENST00000761122.1	HPAT5-247	515	No protein	-	lncRNA	-	-
ENST00000761090.1	HPAT5-215	509	No protein	-	lncRNA	-	-
ENST00000761113.1	HPAT5-238	507	No protein	-	lncRNA	-	-
ENST00000761110.1	HPAT5-235	502	No protein	-	lncRNA	-	-
ENST00000761093.1	HPAT5-218	499	No protein	-	lncRNA	-	-
ENST00000761120.1	HPAT5-245	499	No protein	-	lncRNA	-	-
ENST00000761087.1	HPAT5-212	479	No protein	-	lncRNA	-	-
ENST00000761135.1	HPAT5-260	475	No protein	-	lncRNA	-	-
ENST00000761089.1	HPAT5-214	467	No protein	-	lncRNA	-	-
ENST00000761108.1	HPAT5-233	440	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000761119.1	HPAT5-244	435	No protein	-	lncRNA	-	-
ENST00000761088.1	HPAT5-213	430	No protein	-	lncRNA	-	-
ENST00000761111.1	HPAT5-236	409	No protein	-	lncRNA	-	-
ENST00000761096.1	HPAT5-221	399	No protein	-	lncRNA	-	-
ENST00000761086.1	HPAT5-211	396	No protein	-	lncRNA	-	-
ENST00000761095.1	HPAT5-220	382	No protein	-	lncRNA	-	-
ENST00000761130.1	HPAT5-255	381	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000761114.1	HPAT5-239	380	No protein	-	lncRNA	-	-
ENST00000761084.1	HPAT5-209	370	No protein	-	lncRNA	-	-
ENST00000761085.1	HPAT5-210	338	No protein	-	lncRNA	-	-
ENST00000439207.1	HPAT5-201	205	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,

Gene: HPAT5 ENSG00000280707

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Gene: HPAT5 ENSG00000280707

Summary

About Us

Get help

Our sister sites

Follow us