Gene: CISTR ENSG00000260492

Description

chondrogenesis-associated transcript [Source:HGNC Symbol;Acc:HGNC:49426]

Gene Synonyms

CISTR-ACT, CISTRACT, RE52431

Location

Chromosome 12: 53,739,758-53,757,243 reverse strand.

GRCh38:CM000674.2

About this gene

This gene has 51 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000663667.3	CISTR-203	1367	No protein	-	lncRNA	NR_186108.1	The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select, A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000820144.1	CISTR-229	1719	No protein	-	lncRNA	-	-
ENST00000669269.1	CISTR-204	1566	No protein	-	lncRNA	-	-
ENST00000820142.1	CISTR-227	1417	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000820145.1	CISTR-230	1415	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000820152.1	CISTR-237	1363	No protein	-	lncRNA	-	-
ENST00000820149.1	CISTR-234	1341	No protein	-	lncRNA	-	-
ENST00000718027.1	CISTR-207	1289	No protein	-	lncRNA	-	-
ENST00000820141.1	CISTR-226	1275	No protein	-	lncRNA	-	-
ENST00000820151.1	CISTR-236	1267	No protein	-	lncRNA	-	-
ENST00000718031.1	CISTR-211	1267	No protein	-	lncRNA	-	-
ENST00000820160.1	CISTR-245	1248	No protein	-	lncRNA	-	-
ENST00000820164.1	CISTR-249	1199	No protein	-	lncRNA	-	-
ENST00000820147.1	CISTR-232	1189	No protein	-	lncRNA	-	-
ENST00000718029.1	CISTR-209	1179	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000820136.1	CISTR-221	1123	No protein	-	lncRNA	-	-
ENST00000820159.1	CISTR-244	1089	No protein	-	lncRNA	-	-
ENST00000820155.1	CISTR-240	1039	No protein	-	lncRNA	-	-
ENST00000718028.1	CISTR-208	949	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000820139.1	CISTR-224	941	No protein	-	lncRNA	-	-
ENST00000820146.1	CISTR-231	897	No protein	-	lncRNA	-	-
ENST00000820165.1	CISTR-250	889	No protein	-	lncRNA	-	-
ENST00000820143.1	CISTR-228	872	No protein	-	lncRNA	-	-
ENST00000820137.1	CISTR-222	865	No protein	-	lncRNA	-	-
ENST00000820134.1	CISTR-219	858	No protein	-	lncRNA	-	-
ENST00000820148.1	CISTR-233	849	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000820130.1	CISTR-215	849	No protein	-	lncRNA	-	-
ENST00000820128.1	CISTR-213	842	No protein	-	lncRNA	-	-
ENST00000820163.1	CISTR-248	819	No protein	-	lncRNA	-	-
ENST00000820135.1	CISTR-220	797	No protein	-	lncRNA	-	-
ENST00000820153.1	CISTR-238	783	No protein	-	lncRNA	-	-
ENST00000820158.1	CISTR-243	781	No protein	-	lncRNA	-	-
ENST00000820157.1	CISTR-242	774	No protein	-	lncRNA	-	-
ENST00000820138.1	CISTR-223	770	No protein	-	lncRNA	-	-
ENST00000820154.1	CISTR-239	763	No protein	-	lncRNA	-	-
ENST00000820133.1	CISTR-218	755	No protein	-	lncRNA	-	-
ENST00000718025.1	CISTR-205	740	No protein	-	lncRNA	-	-
ENST00000820129.1	CISTR-214	736	No protein	-	lncRNA	-	-
ENST00000820140.1	CISTR-225	699	No protein	-	lncRNA	-	-
ENST00000820150.1	CISTR-235	685	No protein	-	lncRNA	-	-
ENST00000718030.1	CISTR-210	670	No protein	-	lncRNA	-	-
ENST00000820162.1	CISTR-247	650	No protein	-	lncRNA	-	-
ENST00000718026.1	CISTR-206	623	No protein	-	lncRNA	-	-
ENST00000820132.1	CISTR-217	614	No protein	-	lncRNA	-	-
ENST00000570015.2	CISTR-201	613	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000820156.1	CISTR-241	512	No protein	-	lncRNA	-	-
ENST00000820127.1	CISTR-212	501	No protein	-	lncRNA	-	-
ENST00000820131.1	CISTR-216	492	No protein	-	lncRNA	-	-
ENST00000626733.1	CISTR-202	464	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000820161.1	CISTR-246	458	No protein	-	lncRNA	-	-
ENST00000820166.1	CISTR-251	407	No protein	-	lncRNA	-	-

Gene: CISTR ENSG00000260492

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Gene: CISTR ENSG00000260492

Summary

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