Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
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Molecular interactions
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Gene: CRAT37 ENSG00000258551

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Description

cervical cancer-associated transcript 37 [Source:NCBI gene (formerly Entrezgene);Acc:101926928]

Location

Chromosome 15: 91,373,681-91,653,390 forward strand.

GRCh38:CM000677.2

About this gene

This gene has 18 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	RefSeq Match	Flags
ENST00000687281.2	CRAT37-204	1145	No protein	-	lncRNA		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000554333.1	CRAT37-201	2140	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000664984.1	CRAT37-203	1345	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000761259.1	CRAT37-214	1276	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000761258.1	CRAT37-213	1269	No protein	-	lncRNA		-	-
ENST00000555947.7	CRAT37-202	1229	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000761251.1	CRAT37-206	1192	No protein	-	lncRNA		-	-
ENST00000761257.1	CRAT37-212	1153	No protein	-	lncRNA		-	-
ENST00000761256.1	CRAT37-211	1132	No protein	-	lncRNA		-	-
ENST00000761250.1	CRAT37-205	1099	No protein	-	lncRNA		-	-
ENST00000761254.1	CRAT37-209	1065	No protein	-	lncRNA		-	-
ENST00000761261.1	CRAT37-216	1016	No protein	-	lncRNA		-	-
ENST00000761253.1	CRAT37-208	828	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000761252.1	CRAT37-207	763	No protein	-	lncRNA		-	-
ENST00000761260.1	CRAT37-215	626	No protein	-	lncRNA		-	-
ENST00000761263.1	CRAT37-218	598	No protein	-	lncRNA		-	-
ENST00000761255.1	CRAT37-210	588	No protein	-	lncRNA		-	-
ENST00000761262.1	CRAT37-217	529	No protein	-	lncRNA		-	-

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Summary

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