Gene: LINC02197 ENSG00000250387

Description

long intergenic non-protein coding RNA 2197 [Source:HGNC Symbol;Acc:HGNC:53063]

Location

Chromosome 5: 71,314,692-71,455,593 reverse strand.

GRCh38:CM000667.2

View alleles of this gene on alternative sequences

About this gene

This gene has 39 transcripts (splice variants) and 1 gene allele.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000773708.1	LINC02197-209	721	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000773726.1	LINC02197-227	2768	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000502659.2	LINC02197-201	2767	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000773722.1	LINC02197-223	2532	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000773711.1	LINC02197-212	2421	No protein	-	lncRNA	-	-
ENST00000773723.1	LINC02197-224	1955	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000773714.1	LINC02197-215	1597	No protein	-	lncRNA	-	-
ENST00000773717.1	LINC02197-218	1568	No protein	-	lncRNA	-	-
ENST00000773715.1	LINC02197-216	1487	No protein	-	lncRNA	-	-
ENST00000717720.1	LINC02197-205	1469	No protein	-	lncRNA	-	-
ENST00000773719.1	LINC02197-220	1440	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000773712.1	LINC02197-213	1428	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000773716.1	LINC02197-217	1347	No protein	-	lncRNA	-	-
ENST00000773720.1	LINC02197-221	1337	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000773713.1	LINC02197-214	1243	No protein	-	lncRNA	-	-
ENST00000773718.1	LINC02197-219	1220	No protein	-	lncRNA	-	-
ENST00000773737.1	LINC02197-238	1156	No protein	-	lncRNA	-	-
ENST00000671145.1	LINC02197-204	1099	No protein	-	lncRNA	-	-
ENST00000717721.1	LINC02197-206	1094	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000773721.1	LINC02197-222	997	No protein	-	lncRNA	-	-
ENST00000517705.1	LINC02197-202	965	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000773735.1	LINC02197-236	950	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000773724.1	LINC02197-225	822	No protein	-	lncRNA	-	-
ENST00000717722.1	LINC02197-207	819	No protein	-	lncRNA	-	-
ENST00000717723.1	LINC02197-208	808	No protein	-	lncRNA	-	-
ENST00000773710.1	LINC02197-211	777	No protein	-	lncRNA	-	-
ENST00000773736.1	LINC02197-237	759	No protein	-	lncRNA	-	-
ENST00000773732.1	LINC02197-233	720	No protein	-	lncRNA	-	-
ENST00000773709.1	LINC02197-210	692	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000773733.1	LINC02197-234	678	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000773727.1	LINC02197-228	671	No protein	-	lncRNA	-	-
ENST00000773729.1	LINC02197-230	669	No protein	-	lncRNA	-	-
ENST00000773728.1	LINC02197-229	668	No protein	-	lncRNA	-	-
ENST00000773730.1	LINC02197-231	588	No protein	-	lncRNA	-	-
ENST00000773731.1	LINC02197-232	574	No protein	-	lncRNA	-	-
ENST00000773725.1	LINC02197-226	555	No protein	-	lncRNA	-	-
ENST00000518473.1	LINC02197-203	501	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000773738.1	LINC02197-239	444	No protein	-	lncRNA	-	-
ENST00000773734.1	LINC02197-235	433	No protein	-	lncRNA	-	-

Gene: LINC02197 ENSG00000250387

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Gene: LINC02197 ENSG00000250387

Summary

About Us

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