Gene: HLA-DOB ENSG00000241910

Description

major histocompatibility complex, class II, DO beta [Source:HGNC Symbol;Acc:HGNC:4937]

Location

Scaffold HSCHR6_MHC_MCF_CTG1: 4,111,856-4,116,141 reverse strand.

GRCh38:GL000254.2

View this gene on the primary assembly.

About this gene

This gene has 4 transcripts (splice variants) and 1 gene allele.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq Match	Flags
ENST00000454969.6	HLA-DOB-216	1372	273aa	ENSP00000410390.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P13765 Q5QNS2	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENST00000448690.1	HLA-DOB-215	543	181aa	ENSP00000413915.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A140T9U5	-	TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA, 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000477041.5	HLA-DOB-218	1188	38aa	ENSP00000431385.1	Nonsense mediated decay	E9PI00	-	TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENST00000475173.1	HLA-DOB-217	1514	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,

Gene: HLA-DOB ENSG00000241910

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Gene: HLA-DOB ENSG00000241910

Summary

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