Gene: LINC01800 ENSG00000234572

Description

long intergenic non-protein coding RNA 1800 [Source:HGNC Symbol;Acc:HGNC:52590]

Location

Chromosome 2: 64,756,982-64,899,994 reverse strand.

GRCh38:CM000664.2

About this gene

This gene has 35 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000772000.1	LINC01800-203	670	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000445865.2	LINC01800-201	2052	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000772007.1	LINC01800-210	1774	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000772004.1	LINC01800-207	1084	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000772017.1	LINC01800-220	1066	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000772002.1	LINC01800-205	1042	No protein	-	lncRNA	-	-
ENST00000772022.1	LINC01800-225	1002	No protein	-	lncRNA	-	-
ENST00000772015.1	LINC01800-218	939	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000772003.1	LINC01800-206	930	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000772025.1	LINC01800-228	798	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000772019.1	LINC01800-222	796	No protein	-	lncRNA	-	-
ENST00000772027.1	LINC01800-230	795	No protein	-	lncRNA	-	-
ENST00000772001.1	LINC01800-204	781	No protein	-	lncRNA	-	-
ENST00000772016.1	LINC01800-219	775	No protein	-	lncRNA	-	-
ENST00000772023.1	LINC01800-226	727	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000772028.1	LINC01800-231	704	No protein	-	lncRNA	-	-
ENST00000772012.1	LINC01800-215	699	No protein	-	lncRNA	-	-
ENST00000772021.1	LINC01800-224	633	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000772029.1	LINC01800-232	597	No protein	-	lncRNA	-	-
ENST00000772024.1	LINC01800-227	561	No protein	-	lncRNA	-	-
ENST00000772006.1	LINC01800-209	531	No protein	-	lncRNA	-	-
ENST00000772754.1	LINC01800-234	518	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000772010.1	LINC01800-213	515	No protein	-	lncRNA	-	-
ENST00000772008.1	LINC01800-211	510	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000772005.1	LINC01800-208	504	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000772018.1	LINC01800-221	494	No protein	-	lncRNA	-	-
ENST00000772014.1	LINC01800-217	491	No protein	-	lncRNA	-	-
ENST00000772009.1	LINC01800-212	466	No protein	-	lncRNA	-	-
ENST00000772020.1	LINC01800-223	456	No protein	-	lncRNA	-	-
ENST00000772011.1	LINC01800-214	454	No protein	-	lncRNA	-	-
ENST00000772755.1	LINC01800-235	442	No protein	-	lncRNA	-	-
ENST00000772753.1	LINC01800-233	383	No protein	-	lncRNA	-	-
ENST00000692605.1	LINC01800-202	305	No protein	-	lncRNA	-	-
ENST00000772013.1	LINC01800-216	299	No protein	-	lncRNA	-	-
ENST00000772026.1	LINC01800-229	289	No protein	-	lncRNA	-	-

Gene: LINC01800 ENSG00000234572

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Gene: LINC01800 ENSG00000234572

Summary

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