Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
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ID History
- Gene history

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Gene: RB1-DT ENSG00000231473

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Description

RB1 divergent transcript [Source:HGNC Symbol;Acc:HGNC:42778]

Gene Synonyms

LINC00441, NCRNA-RB1

Location

Chromosome 13: 48,291,549-48,303,723 reverse strand.

GRCh38:CM000675.2

About this gene

This gene has 19 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	RefSeq Match	Flags
ENST00000718572.1	RB1-DT-207	739	No protein	-	lncRNA		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000669900.1	RB1-DT-203	1660	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000433480.4	RB1-DT-201	1607	No protein	-	lncRNA		-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000701097.1	RB1-DT-206	1494	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000718582.1	RB1-DT-217	1463	No protein	-	lncRNA		-	-
ENST00000436963.3	RB1-DT-202	1410	No protein	-	lncRNA		-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000700890.2	RB1-DT-204	1407	No protein	-	lncRNA		-	-
ENST00000718579.1	RB1-DT-214	1328	No protein	-	lncRNA		-	-
ENST00000718578.1	RB1-DT-213	1319	No protein	-	lncRNA		-	-
ENST00000718577.1	RB1-DT-212	1188	No protein	-	lncRNA		-	-
ENST00000718576.1	RB1-DT-211	1169	No protein	-	lncRNA		-	-
ENST00000718580.1	RB1-DT-215	934	No protein	-	lncRNA		-	-
ENST00000718575.1	RB1-DT-210	902	No protein	-	lncRNA		-	-
ENST00000718573.1	RB1-DT-208	898	No protein	-	lncRNA		-	-
ENST00000700897.1	RB1-DT-205	799	No protein	-	lncRNA		-	-
ENST00000718574.1	RB1-DT-209	702	No protein	-	lncRNA		-	-
ENST00000718584.1	RB1-DT-219	652	No protein	-	lncRNA		-	-
ENST00000718583.1	RB1-DT-218	617	No protein	-	lncRNA		-	-
ENST00000718581.1	RB1-DT-216	541	No protein	-	lncRNA		-	-

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Summary

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