Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: LINC00448 ENSG00000228669

.

Description

long intergenic non-protein coding RNA 448 [Source:HGNC Symbol;Acc:HGNC:42785]

Location

Chromosome 13: 62,672,285-62,796,726 reverse strand.

GRCh38:CM000675.2

About this gene

This gene has 18 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	RefSeq Match	Flags
ENST00000757076.1	LINC00448-208	591	No protein	-	lncRNA		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000667975.1	LINC00448-206	1146	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000657217.1	LINC00448-204	1099	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000671427.1	LINC00448-207	1045	No protein	-	lncRNA		-	-
ENST00000656857.1	LINC00448-203	1031	No protein	-	lncRNA		-	-
ENST00000658776.1	LINC00448-205	908	No protein	-	lncRNA		-	-
ENST00000438352.3	LINC00448-201	860	No protein	-	lncRNA		-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000757078.1	LINC00448-210	799	No protein	-	lncRNA		-	-
ENST00000757080.1	LINC00448-212	581	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000757079.1	LINC00448-211	553	No protein	-	lncRNA		-	-
ENST00000757081.1	LINC00448-213	480	No protein	-	lncRNA		-	-
ENST00000757077.1	LINC00448-209	465	No protein	-	lncRNA		-	-
ENST00000757086.1	LINC00448-218	445	No protein	-	lncRNA		-	-
ENST00000448411.1	LINC00448-202	433	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000757083.1	LINC00448-215	425	No protein	-	lncRNA		-	-
ENST00000757082.1	LINC00448-214	379	No protein	-	lncRNA		-	-
ENST00000757084.1	LINC00448-216	360	No protein	-	lncRNA		-	-
ENST00000757085.1	LINC00448-217	348	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,

.

Summary

.

.