Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: LINC02089 ENSG00000226364

.

Description

long intergenic non-protein coding RNA 2089 [Source:HGNC Symbol;Acc:HGNC:52940]

Gene Synonyms

C17ORF112, LINC02876

Location

Chromosome 17: 52,862,065-53,105,367 forward strand.

GRCh38:CM000679.2

About this gene

This gene has 15 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	RefSeq Match	Flags
ENST00000715801.1	LINC02089-205	1009	No protein	-	lncRNA		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000715800.1	LINC02089-204	1528	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000753156.1	LINC02089-208	1330	No protein	-	lncRNA		-	-
ENST00000753155.1	LINC02089-207	1167	No protein	-	lncRNA		-	-
ENST00000623702.2	LINC02089-202	859	No protein	-	lncRNA		-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000753163.1	LINC02089-215	836	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000753160.1	LINC02089-212	816	No protein	-	lncRNA		-	-
ENST00000649605.2	LINC02089-203	791	No protein	-	lncRNA		-	-
ENST00000753161.1	LINC02089-213	763	No protein	-	lncRNA		-	-
ENST00000412360.2	LINC02089-201	753	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000753162.1	LINC02089-214	730	No protein	-	lncRNA		-	-
ENST00000753157.1	LINC02089-209	698	No protein	-	lncRNA		-	-
ENST00000753158.1	LINC02089-210	646	No protein	-	lncRNA		-	-
ENST00000741187.1	LINC02089-206	449	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000753159.1	LINC02089-211	409	No protein	-	lncRNA		-	-

.

Summary

.

.