Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
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Gene: PPP1R26-AS1 ENSG00000225361

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Description

PPP1R26 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:48717]

Location

Chromosome 9: 135,417,086-135,480,777 reverse strand.

GRCh38:CM000671.2

About this gene

This gene has 11 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	RefSeq Match	Flags
ENST00000765286.1	PPP1R26-AS1-207	1362	No protein	-	lncRNA		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000655118.1	PPP1R26-AS1-205	3043	No protein	-	lncRNA		-	-
ENST00000603624.1	PPP1R26-AS1-202	2919	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000660718.1	PPP1R26-AS1-206	2285	No protein	-	lncRNA		-	-
ENST00000765289.1	PPP1R26-AS1-210	1099	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000765288.1	PPP1R26-AS1-209	981	No protein	-	lncRNA		-	-
ENST00000765290.1	PPP1R26-AS1-211	815	No protein	-	lncRNA		-	-
ENST00000455039.3	PPP1R26-AS1-201	643	No protein	-	lncRNA		-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000765287.1	PPP1R26-AS1-208	485	No protein	-	lncRNA		-	-
ENST00000603893.1	PPP1R26-AS1-203	424	No protein	-	lncRNA		-	TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENST00000605260.1	PPP1R26-AS1-204	414	No protein	-	lncRNA		-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,

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Summary

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