Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
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Molecular interactions
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Gene: CHKB-DT ENSG00000205559

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Description

CHKB divergent transcript [Source:HGNC Symbol;Acc:HGNC:40146]

Gene Synonyms

CHKB-AS1, HRAT, TCONS_00029632

Location

Chromosome 22: 50,583,026-50,597,599 forward strand.

GRCh38:CM000684.2

About this gene

This gene has 11 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	RefSeq Match	Flags
ENST00000803312.1	CHKB-DT-210	1110	No protein	-	lncRNA		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000652967.1	CHKB-DT-204	2380	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000662119.1	CHKB-DT-208	2264	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000654355.1	CHKB-DT-205	2093	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000803313.1	CHKB-DT-211	1105	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000656328.1	CHKB-DT-207	940	No protein	-	lncRNA		-	-
ENST00000666183.1	CHKB-DT-209	807	No protein	-	lncRNA		-	-
ENST00000648558.1	CHKB-DT-203	759	No protein	-	lncRNA		-	-
ENST00000654727.1	CHKB-DT-206	710	No protein	-	lncRNA		-	-
ENST00000380711.3	CHKB-DT-201	578	No protein	-	lncRNA		-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000609758.1	CHKB-DT-202	448	No protein	-	lncRNA		-	TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,

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Summary

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