Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: PRDX6-AS1 ENSG00000203739

.

Description

PRDX6 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:54870]

Location

Chromosome 1: 173,417,789-173,489,407 reverse strand.

GRCh38:CM000663.2

About this gene

This gene has 15 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	RefSeq Match	Flags
ENST00000669220.1	PRDX6-AS1-209	1365	No protein	-	lncRNA		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000367716.3	PRDX6-AS1-201	1815	No protein	-	lncRNA		-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000660739.1	PRDX6-AS1-206	1662	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000437190.2	PRDX6-AS1-202	1469	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000661267.1	PRDX6-AS1-208	1370	No protein	-	lncRNA		-	-
ENST00000654650.1	PRDX6-AS1-204	1301	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000778746.1	PRDX6-AS1-213	1115	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000661092.2	PRDX6-AS1-207	1091	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000702826.1	PRDX6-AS1-211	1087	No protein	-	lncRNA		-	-
ENST00000778745.1	PRDX6-AS1-212	995	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000654140.1	PRDX6-AS1-203	960	No protein	-	lncRNA		-	-
ENST00000659863.1	PRDX6-AS1-205	947	No protein	-	lncRNA		-	-
ENST00000778748.1	PRDX6-AS1-215	758	No protein	-	lncRNA		-	-
ENST00000688677.1	PRDX6-AS1-210	598	No protein	-	lncRNA		-	-
ENST00000778747.1	PRDX6-AS1-214	311	No protein	-	lncRNA		-	-

.

Summary

.

.