Human (GRCh38.p14)
Description

SPG11 vesicle trafficking associated, spatacsin [Source:HGNC Symbol;Acc:HGNC:11226]

Gene Synonyms

ALS5, FLJ21439, KIAA1840

Location

Chromosome 15: 44,554,818-44,663,688 reverse strand.

GRCh38:CM000677.2

About this gene

This gene has 41 transcripts (splice variants), 198 orthologues and is associated with 7 phenotypes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000261866.12SPG11-20177722443aaENSP00000261866.7
 
Protein coding
CCDS10112Q96JI7-1 NM_025137.4MANE SelectEnsembl CanonicalGENCODE basicTSL:1
ENST00000682065.1SPG11-22176242395aaENSP00000507025.1
 
Protein coding
CCDS91991A0A804HID9 -GENCODE basic
ENST00000684235.1SPG11-23975742392aaENSP00000508295.1
 
Protein coding
A0A804HLC5 -GENCODE basic
ENST00000682669.1SPG11-22675672376aaENSP00000507782.1
 
Protein coding
A0A804HK59 -GENCODE basic
ENST00000535302.6SPG11-20372882330aaENSP00000445278.2
 
Protein coding
CCDS53939Q96JI7-3 -GENCODE basicTSL:1
ENST00000559511.6SPG11-21672792284aaENSP00000453246.2
 
Protein coding
H0YLK7 -GENCODE basicAPPRIS P1TSL:2
ENST00000427534.6SPG11-20269352265aaENSP00000396110.2
 
Protein coding
C4B7M2 -GENCODE basicTSL:1
ENST00000558319.5SPG11-20964262079aaENSP00000453599.1
 
Protein coding
Q96JI7-2 -GENCODE basicTSL:5
ENST00000559193.5SPG11-2142579779aaENSP00000453848.1
 
Protein coding
H0YN34 -GENCODE basicTSL:1
ENST00000558138.2SPG11-2071023340aaENSP00000453314.2
 
Protein coding
H0YLR8 -TSL:5CDS 5' incomplete
ENST00000557866.1SPG11-204468156aaENSP00000453227.1
 
Non stop decay
A0A075B718 -TSL:2CDS 5' incomplete
ENST00000682495.1SPG11-22478931210aaENSP00000507166.1
 
Nonsense mediated decay
A0A804HIP5 --
ENST00000682460.1SPG11-22376911221aaENSP00000508334.1
 
Nonsense mediated decay
A0A804HLF9 --
ENST00000683734.1SPG11-23576121969aaENSP00000508319.1
 
Nonsense mediated decay
A0A804HLE6 --
ENST00000684038.1SPG11-23875861135aaENSP00000507141.1
 
Nonsense mediated decay
A0A804HIM5 --
ENST00000683186.1SPG11-23175781020aaENSP00000507268.1
 
Nonsense mediated decay
A0A804HLG4 --
ENST00000683496.1SPG11-23374252004aaENSP00000506968.1
 
Nonsense mediated decay
A0A804HI99 --
ENST00000684676.1SPG11-24161951873aaENSP00000506948.1
 
Nonsense mediated decay
A0A804HI84 --
ENST00000682788.1SPG11-22750821639aaENSP00000508089.1
 
Nonsense mediated decay
A0A804HKV6 --
ENST00000683121.1SPG11-23047721492aaENSP00000507557.1
 
Nonsense mediated decay
A0A804HJL9 --
ENST00000682915.1SPG11-22939851197aaENSP00000507493.1
 
Nonsense mediated decay
A0A804HJG2 --
ENST00000683255.1SPG11-23234341020aaENSP00000508340.1
 
Nonsense mediated decay
A0A804HLG4 --
ENST00000683573.1SPG11-2343146949aaENSP00000508031.1
 
Nonsense mediated decay
A0A804HKQ8 --
ENST00000682648.1SPG11-2251762No protein-
 
Protein coding CDS not defined
---
ENST00000558253.5SPG11-208879No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000558790.5SPG11-211858No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000559347.1SPG11-215716No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000683753.1SPG11-2366783No protein-
 
Retained intron
---
ENST00000682410.1SPG11-2223129No protein-
 
Retained intron
---
ENST00000682877.1SPG11-2283080No protein-
 
Retained intron
---
ENST00000684490.1SPG11-2402881No protein-
 
Retained intron
---
ENST00000561391.2SPG11-2202861No protein-
 
Retained intron
--TSL:3
ENST00000683838.1SPG11-2371955No protein-
 
Retained intron
---
ENST00000558989.1SPG11-2131816No protein-
 
Retained intron
--TSL:3
ENST00000558080.1SPG11-205759No protein-
 
Retained intron
--TSL:1
ENST00000558988.5SPG11-212620No protein-
 
Retained intron
--TSL:3
ENST00000558561.1SPG11-210555No protein-
 
Retained intron
--TSL:3
ENST00000561268.5SPG11-219530No protein-
 
Retained intron
--TSL:4
ENST00000558093.1SPG11-206526No protein-
 
Retained intron
--TSL:3
ENST00000559933.1SPG11-217518No protein-
 
Retained intron
--TSL:2
ENST00000560299.1SPG11-218437No protein-
 
Retained intron
--TSL:3