Gene: GAPLINC ENSG00000266835

Description

gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA [Source:HGNC Symbol;Acc:HGNC:51308]

Gene Synonyms

LINC01540, LNCRNA-UC002KMD.1, RP11-838N2.4, TCONS_00026238

Location

Chromosome 18: 3,466,200-3,487,049 forward strand.

GRCh38:CM000680.2

About this gene

This gene has 14 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000790303.1	GAPLINC-206	603	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000579007.6	GAPLINC-202	647	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000790310.1	GAPLINC-213	624	No protein	-	lncRNA	-	-
ENST00000578664.2	GAPLINC-201	623	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000581029.5	GAPLINC-203	613	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000790304.1	GAPLINC-207	559	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000790305.1	GAPLINC-208	548	No protein	-	lncRNA	-	-
ENST00000790308.1	GAPLINC-211	503	No protein	-	lncRNA	-	-
ENST00000581442.6	GAPLINC-204	501	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000790306.1	GAPLINC-209	494	No protein	-	lncRNA	-	-
ENST00000700774.2	GAPLINC-205	443	No protein	-	lncRNA	-	-
ENST00000790307.1	GAPLINC-210	419	No protein	-	lncRNA	-	-
ENST00000790309.1	GAPLINC-212	395	No protein	-	lncRNA	-	-
ENST00000790311.1	GAPLINC-214	304	No protein	-	lncRNA	-	-

Gene: GAPLINC ENSG00000266835

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Gene: GAPLINC ENSG00000266835

Summary

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