Gene: LINC01170 ENSG00000253807

Description

long intergenic non-protein coding RNA 1170 [Source:HGNC Symbol;Acc:HGNC:49542]

Location

Chromosome 5: 124,059,664-124,438,655 reverse strand.

GRCh38:CM000667.2

About this gene

This gene has 29 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000750061.1	LINC01170-206	1274	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000662643.2	LINC01170-205	2560	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000653233.2	LINC01170-203	2473	No protein	-	lncRNA	-	-
ENST00000657766.2	LINC01170-204	2431	No protein	-	lncRNA	-	-
ENST00000750069.1	LINC01170-214	1093	No protein	-	lncRNA	-	-
ENST00000750063.1	LINC01170-208	951	No protein	-	lncRNA	-	-
ENST00000750066.1	LINC01170-211	947	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000750068.1	LINC01170-213	890	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000750062.1	LINC01170-207	868	No protein	-	lncRNA	-	-
ENST00000628324.2	LINC01170-202	650	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000519703.3	LINC01170-201	613	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000750065.1	LINC01170-210	562	No protein	-	lncRNA	-	-
ENST00000750079.1	LINC01170-224	556	No protein	-	lncRNA	-	-
ENST00000750074.1	LINC01170-219	527	No protein	-	lncRNA	-	-
ENST00000750072.1	LINC01170-217	519	No protein	-	lncRNA	-	-
ENST00000750067.1	LINC01170-212	516	No protein	-	lncRNA	-	-
ENST00000750070.1	LINC01170-215	512	No protein	-	lncRNA	-	-
ENST00000750080.1	LINC01170-225	512	No protein	-	lncRNA	-	-
ENST00000750084.1	LINC01170-229	476	No protein	-	lncRNA	-	-
ENST00000750064.1	LINC01170-209	473	No protein	-	lncRNA	-	-
ENST00000750082.1	LINC01170-227	439	No protein	-	lncRNA	-	-
ENST00000750071.1	LINC01170-216	434	No protein	-	lncRNA	-	-
ENST00000750078.1	LINC01170-223	365	No protein	-	lncRNA	-	-
ENST00000750073.1	LINC01170-218	357	No protein	-	lncRNA	-	-
ENST00000750076.1	LINC01170-221	349	No protein	-	lncRNA	-	-
ENST00000750081.1	LINC01170-226	346	No protein	-	lncRNA	-	-
ENST00000750077.1	LINC01170-222	333	No protein	-	lncRNA	-	-
ENST00000750075.1	LINC01170-220	254	No protein	-	lncRNA	-	-
ENST00000750083.1	LINC01170-228	186	No protein	-	lncRNA	-	-

Gene: LINC01170 ENSG00000253807

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Gene: LINC01170 ENSG00000253807

Summary

About Us

Get help

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