Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: SLEAR ENSG00000248599

.

Description

STAT1 regulated ILF2 complex interacting lncRNA [Source:HGNC Symbol;Acc:HGNC:54824]

Gene Synonyms

FLJ42969

Location

Chromosome 8: 101,034,868-101,076,407 forward strand.

GRCh38:CM000670.2

About this gene

This gene has 14 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	RefSeq Match	Flags
ENST00000665441.1	SLEAR-211	1150	No protein	-	lncRNA		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000665627.1	SLEAR-212	2368	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000514926.2	SLEAR-201	1988	No protein	-	lncRNA		-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000660508.1	SLEAR-209	1869	No protein	-	lncRNA		-	-
ENST00000656334.1	SLEAR-205	1536	No protein	-	lncRNA		-	-
ENST00000653983.1	SLEAR-203	1454	No protein	-	lncRNA		-	-
ENST00000658504.1	SLEAR-208	1373	No protein	-	lncRNA		-	-
ENST00000655682.1	SLEAR-204	1330	No protein	-	lncRNA		-	-
ENST00000669613.1	SLEAR-214	1265	No protein	-	lncRNA		-	-
ENST00000653963.1	SLEAR-202	1209	No protein	-	lncRNA		-	-
ENST00000662046.1	SLEAR-210	1194	No protein	-	lncRNA		-	-
ENST00000656569.1	SLEAR-206	1183	No protein	-	lncRNA		-	-
ENST00000666510.1	SLEAR-213	1118	No protein	-	lncRNA		-	-
ENST00000657076.1	SLEAR-207	865	No protein	-	lncRNA		-	-

.

Summary

.

.