Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: LINC00857 ENSG00000237523

.

Description

long intergenic non-protein coding RNA 857 [Source:HGNC Symbol;Acc:HGNC:45114]

Gene Synonyms

HUMT

Location

Chromosome 10: 80,207,192-80,235,950 forward strand.

GRCh38:CM000672.2

About this gene

This gene has 14 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	RefSeq Match	Flags
ENST00000819791.1	LINC00857-205	1632	No protein	-	lncRNA		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000660450.2	LINC00857-203	2499	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000671081.2	LINC00857-204	2474	No protein	-	lncRNA		-	-
ENST00000422847.1	LINC00857-201	2161	No protein	-	lncRNA		-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000819798.1	LINC00857-212	2088	No protein	-	lncRNA		-	-
ENST00000819792.1	LINC00857-206	1531	No protein	-	lncRNA		-	-
ENST00000819800.1	LINC00857-214	1377	No protein	-	lncRNA		-	-
ENST00000819795.1	LINC00857-209	1223	No protein	-	lncRNA		-	-
ENST00000819796.1	LINC00857-210	1199	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000819793.1	LINC00857-207	1167	No protein	-	lncRNA		-	-
ENST00000819794.1	LINC00857-208	1166	No protein	-	lncRNA		-	-
ENST00000819799.1	LINC00857-213	1161	No protein	-	lncRNA		-	-
ENST00000819797.1	LINC00857-211	861	No protein	-	lncRNA		-	-
ENST00000432308.1	LINC00857-202	629	No protein	-	lncRNA		-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,

.

Summary

.

.