Gene: GACAT3 ENSG00000236289

Description

gastric cancer associated transcript 3 [Source:HGNC Symbol;Acc:HGNC:50847]

Gene Synonyms

LINC01458, LNCRNA-AC130710

Location

Chromosome 2: 16,013,928-16,087,201 forward strand.

GRCh38:CM000664.2

About this gene

This gene has 21 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000652394.1	GACAT3-206	1358	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000667080.1	GACAT3-208	2267	No protein	-	lncRNA	-	-
ENST00000777285.1	GACAT3-215	1799	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000777279.1	GACAT3-209	1739	No protein	-	lncRNA	-	-
ENST00000651908.2	GACAT3-204	1736	No protein	-	lncRNA	-	-
ENST00000777281.1	GACAT3-211	1721	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000777283.1	GACAT3-213	1559	No protein	-	lncRNA	-	-
ENST00000651993.2	GACAT3-205	1510	No protein	-	lncRNA	-	-
ENST00000777280.1	GACAT3-210	1508	No protein	-	lncRNA	-	-
ENST00000651705.1	GACAT3-203	1457	No protein	-	lncRNA	-	-
ENST00000652731.1	GACAT3-207	1371	No protein	-	lncRNA	-	-
ENST00000777284.1	GACAT3-214	1213	No protein	-	lncRNA	-	-
ENST00000426539.1	GACAT3-201	1096	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000777286.1	GACAT3-216	817	No protein	-	lncRNA	-	-
ENST00000777290.1	GACAT3-220	777	No protein	-	lncRNA	-	-
ENST00000777282.1	GACAT3-212	767	No protein	-	lncRNA	-	-
ENST00000442387.3	GACAT3-202	649	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000777288.1	GACAT3-218	592	No protein	-	lncRNA	-	-
ENST00000777291.1	GACAT3-221	531	No protein	-	lncRNA	-	-
ENST00000777287.1	GACAT3-217	427	No protein	-	lncRNA	-	-
ENST00000777289.1	GACAT3-219	362	No protein	-	lncRNA	-	-

Gene: GACAT3 ENSG00000236289

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Gene: GACAT3 ENSG00000236289

Summary

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