Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: LINC01507 ENSG00000230945

.

Description

long intergenic non-protein coding RNA 1507 [Source:HGNC Symbol;Acc:HGNC:51189]

Gene Synonyms

XLOC_000303

Location

Chromosome 9: 79,975,023-80,182,668 forward strand.

GRCh38:CM000671.2

About this gene

This gene has 17 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	RefSeq Match	Flags
ENST00000827543.1	LINC01507-205	1283	No protein	-	lncRNA		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000827545.1	LINC01507-207	1566	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000827553.1	LINC01507-215	1301	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000827555.1	LINC01507-217	1034	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000827546.1	LINC01507-208	915	No protein	-	lncRNA		-	-
ENST00000827552.1	LINC01507-214	869	No protein	-	lncRNA		-	-
ENST00000827549.1	LINC01507-211	843	No protein	-	lncRNA		-	-
ENST00000827547.1	LINC01507-209	787	No protein	-	lncRNA		-	-
ENST00000827554.1	LINC01507-216	726	No protein	-	lncRNA		-	-
ENST00000827544.1	LINC01507-206	696	No protein	-	lncRNA		-	-
ENST00000827550.1	LINC01507-212	613	No protein	-	lncRNA		-	-
ENST00000622930.1	LINC01507-202	586	No protein	-	lncRNA		-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000797724.1	LINC01507-203	501	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000827548.1	LINC01507-210	500	No protein	-	lncRNA		-	-
ENST00000827551.1	LINC01507-213	482	No protein	-	lncRNA		-	-
ENST00000417801.1	LINC01507-201	446	No protein	-	lncRNA		-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000797725.1	LINC01507-204	384	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,

.

Summary

.

.