Gene: LINC01820 ENSG00000228100

Description

long intergenic non-protein coding RNA 1820 [Source:HGNC Symbol;Acc:HGNC:52625]

Location

Chromosome 2: 46,347,186-46,429,238 reverse strand.

GRCh38:CM000664.2

About this gene

This gene has 64 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000843948.1	LINC01820-208	976	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000843972.1	LINC01820-232	1736	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000843982.1	LINC01820-242	1601	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000843971.1	LINC01820-231	1594	No protein	-	lncRNA	-	-
ENST00000843973.1	LINC01820-233	1570	No protein	-	lncRNA	-	-
ENST00000843990.1	LINC01820-250	1565	No protein	-	lncRNA	-	-
ENST00000843996.1	LINC01820-256	1363	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000843997.1	LINC01820-257	1326	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000669411.1	LINC01820-204	1192	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000843974.1	LINC01820-234	1105	No protein	-	lncRNA	-	-
ENST00000843975.1	LINC01820-235	1091	No protein	-	lncRNA	-	-
ENST00000843991.1	LINC01820-251	1072	No protein	-	lncRNA	-	-
ENST00000843980.1	LINC01820-240	1060	No protein	-	lncRNA	-	-
ENST00000843984.1	LINC01820-244	1030	No protein	-	lncRNA	-	-
ENST00000843979.1	LINC01820-239	929	No protein	-	lncRNA	-	-
ENST00000843978.1	LINC01820-238	918	No protein	-	lncRNA	-	-
ENST00000844004.1	LINC01820-264	908	No protein	-	lncRNA	-	-
ENST00000843977.1	LINC01820-237	906	No protein	-	lncRNA	-	-
ENST00000843988.1	LINC01820-248	895	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000843983.1	LINC01820-243	890	No protein	-	lncRNA	-	-
ENST00000843993.1	LINC01820-253	878	No protein	-	lncRNA	-	-
ENST00000843957.1	LINC01820-217	862	No protein	-	lncRNA	-	-
ENST00000843985.1	LINC01820-245	848	No protein	-	lncRNA	-	-
ENST00000843950.1	LINC01820-210	841	No protein	-	lncRNA	-	-
ENST00000843992.1	LINC01820-252	841	No protein	-	lncRNA	-	-
ENST00000843994.1	LINC01820-254	835	No protein	-	lncRNA	-	-
ENST00000844003.1	LINC01820-263	803	No protein	-	lncRNA	-	-
ENST00000843951.1	LINC01820-211	791	No protein	-	lncRNA	-	-
ENST00000844001.1	LINC01820-261	788	No protein	-	lncRNA	-	-
ENST00000843981.1	LINC01820-241	778	No protein	-	lncRNA	-	-
ENST00000844002.1	LINC01820-262	762	No protein	-	lncRNA	-	-
ENST00000843986.1	LINC01820-246	738	No protein	-	lncRNA	-	-
ENST00000843987.1	LINC01820-247	736	No protein	-	lncRNA	-	-
ENST00000843966.1	LINC01820-226	725	No protein	-	lncRNA	-	-
ENST00000843949.1	LINC01820-209	694	No protein	-	lncRNA	-	-
ENST00000843989.1	LINC01820-249	692	No protein	-	lncRNA	-	-
ENST00000843999.1	LINC01820-259	675	No protein	-	lncRNA	-	-
ENST00000843968.1	LINC01820-228	673	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000844000.1	LINC01820-260	671	No protein	-	lncRNA	-	-
ENST00000843995.1	LINC01820-255	662	No protein	-	lncRNA	-	-
ENST00000843976.1	LINC01820-236	644	No protein	-	lncRNA	-	-
ENST00000418415.2	LINC01820-201	637	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000843956.1	LINC01820-216	623	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000843961.1	LINC01820-221	592	No protein	-	lncRNA	-	-
ENST00000843964.1	LINC01820-224	584	No protein	-	lncRNA	-	-
ENST00000843967.1	LINC01820-227	580	No protein	-	lncRNA	-	-
ENST00000843969.1	LINC01820-229	566	No protein	-	lncRNA	-	-
ENST00000843962.1	LINC01820-222	551	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000843965.1	LINC01820-225	538	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000843959.1	LINC01820-219	535	No protein	-	lncRNA	-	-
ENST00000843970.1	LINC01820-230	533	No protein	-	lncRNA	-	-
ENST00000843963.1	LINC01820-223	523	No protein	-	lncRNA	-	-
ENST00000843955.1	LINC01820-215	522	No protein	-	lncRNA	-	-
ENST00000654557.2	LINC01820-202	518	No protein	-	lncRNA	-	-
ENST00000843960.1	LINC01820-220	517	No protein	-	lncRNA	-	-
ENST00000665509.1	LINC01820-203	483	No protein	-	lncRNA	-	-
ENST00000843953.1	LINC01820-213	480	No protein	-	lncRNA	-	-
ENST00000843958.1	LINC01820-218	475	No protein	-	lncRNA	-	-
ENST00000843998.1	LINC01820-258	448	No protein	-	lncRNA	-	-
ENST00000843946.1	LINC01820-206	426	No protein	-	lncRNA	-	-
ENST00000843952.1	LINC01820-212	396	No protein	-	lncRNA	-	-
ENST00000843945.1	LINC01820-205	394	No protein	-	lncRNA	-	-
ENST00000843954.1	LINC01820-214	359	No protein	-	lncRNA	-	-
ENST00000843947.1	LINC01820-207	340	No protein	-	lncRNA	-	-

Gene: LINC01820 ENSG00000228100

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Gene: LINC01820 ENSG00000228100

Summary

About Us

Get help

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