Gene: LINC00313 ENSG00000185186

Description

long intergenic non-protein coding RNA 313 [Source:HGNC Symbol;Acc:HGNC:16416]

Gene Synonyms

C21ORF84, NCRNA00313

Location

Chromosome 21: 43,439,234-43,479,534 reverse strand.

GRCh38:CM000683.2

About this gene

This gene has 68 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000782250.1	LINC00313-210	1087	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000782280.1	LINC00313-240	1770	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000782303.1	LINC00313-263	1586	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000782282.1	LINC00313-242	1576	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000782274.1	LINC00313-234	1569	No protein	-	lncRNA	-	-
ENST00000782262.1	LINC00313-222	1545	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000782281.1	LINC00313-241	1414	No protein	-	lncRNA	-	-
ENST00000782273.1	LINC00313-233	1386	No protein	-	lncRNA	-	-
ENST00000651216.1	LINC00313-208	1342	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000427188.2	LINC00313-205	1229	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000782278.1	LINC00313-238	1202	No protein	-	lncRNA	-	-
ENST00000782254.1	LINC00313-214	1195	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000782270.1	LINC00313-230	1174	No protein	-	lncRNA	-	-
ENST00000782264.1	LINC00313-224	1104	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000782253.1	LINC00313-213	1023	No protein	-	lncRNA	-	-
ENST00000782259.1	LINC00313-219	1019	No protein	-	lncRNA	-	-
ENST00000782287.1	LINC00313-247	949	No protein	-	lncRNA	-	-
ENST00000782288.1	LINC00313-248	946	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000782295.1	LINC00313-255	942	No protein	-	lncRNA	-	-
ENST00000782277.1	LINC00313-237	938	No protein	-	lncRNA	-	-
ENST00000782298.1	LINC00313-258	936	No protein	-	lncRNA	-	-
ENST00000782284.1	LINC00313-244	910	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000782306.1	LINC00313-266	909	No protein	-	lncRNA	-	-
ENST00000782290.1	LINC00313-250	906	No protein	-	lncRNA	-	-
ENST00000782302.1	LINC00313-262	901	No protein	-	lncRNA	-	-
ENST00000782301.1	LINC00313-261	874	No protein	-	lncRNA	-	-
ENST00000413721.6	LINC00313-202	854	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000332440.5	LINC00313-201	828	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000782263.1	LINC00313-223	828	No protein	-	lncRNA	-	-
ENST00000782272.1	LINC00313-232	826	No protein	-	lncRNA	-	-
ENST00000782289.1	LINC00313-249	807	No protein	-	lncRNA	-	-
ENST00000782260.1	LINC00313-220	793	No protein	-	lncRNA	-	-
ENST00000782292.1	LINC00313-252	778	No protein	-	lncRNA	-	-
ENST00000782265.1	LINC00313-225	751	No protein	-	lncRNA	-	-
ENST00000782305.1	LINC00313-265	742	No protein	-	lncRNA	-	-
ENST00000782267.1	LINC00313-227	730	No protein	-	lncRNA	-	-
ENST00000782266.1	LINC00313-226	719	No protein	-	lncRNA	-	-
ENST00000782304.1	LINC00313-264	714	No protein	-	lncRNA	-	-
ENST00000782296.1	LINC00313-256	704	No protein	-	lncRNA	-	-
ENST00000782300.1	LINC00313-260	686	No protein	-	lncRNA	-	-
ENST00000782251.1	LINC00313-211	685	No protein	-	lncRNA	-	-
ENST00000782271.1	LINC00313-231	685	No protein	-	lncRNA	-	-
ENST00000782286.1	LINC00313-246	684	No protein	-	lncRNA	-	-
ENST00000782297.1	LINC00313-257	659	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000782276.1	LINC00313-236	640	No protein	-	lncRNA	-	-
ENST00000451543.6	LINC00313-207	639	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000782268.1	LINC00313-228	636	No protein	-	lncRNA	-	-
ENST00000782256.1	LINC00313-216	622	No protein	-	lncRNA	-	-
ENST00000782257.1	LINC00313-217	617	No protein	-	lncRNA	-	-
ENST00000782279.1	LINC00313-239	608	No protein	-	lncRNA	-	-
ENST00000782275.1	LINC00313-235	598	No protein	-	lncRNA	-	-
ENST00000782283.1	LINC00313-243	597	No protein	-	lncRNA	-	-
ENST00000782294.1	LINC00313-254	594	No protein	-	lncRNA	-	-
ENST00000418516.2	LINC00313-203	571	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000782255.1	LINC00313-215	566	No protein	-	lncRNA	-	-
ENST00000782293.1	LINC00313-253	555	No protein	-	lncRNA	-	-
ENST00000782291.1	LINC00313-251	548	No protein	-	lncRNA	-	-
ENST00000663956.2	LINC00313-209	546	No protein	-	lncRNA	-	-
ENST00000782269.1	LINC00313-229	500	No protein	-	lncRNA	-	-
ENST00000782307.1	LINC00313-267	498	No protein	-	lncRNA	-	-
ENST00000782258.1	LINC00313-218	492	No protein	-	lncRNA	-	-
ENST00000426942.6	LINC00313-204	480	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000782252.1	LINC00313-212	473	No protein	-	lncRNA	-	-
ENST00000441283.1	LINC00313-206	448	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000782308.1	LINC00313-268	407	No protein	-	lncRNA	-	-
ENST00000782261.1	LINC00313-221	392	No protein	-	lncRNA	-	-
ENST00000782299.1	LINC00313-259	391	No protein	-	lncRNA	-	-
ENST00000782285.1	LINC00313-245	370	No protein	-	lncRNA	-	-

Gene: LINC00313 ENSG00000185186

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Gene: LINC00313 ENSG00000185186

Summary

About Us

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