Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: smg5 ENSGACG00000013142

.

Description

SMG5 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-050913-144]

Location

Primary_assembly XX: 3,876,162-3,888,690 reverse strand.

GAculeatus_UGA_version5:CM029302.1

About this gene

This gene has 3 transcripts (splice variants), 209 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSGACT00000076001.1	smg5-202	4680	1159aa	ENSGACP00000035182.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAQ4P8W4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSGACT00000049725.1	smg5-203	4494	1097aa	ENSGACP00000042030.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAQ4PT81	-
ENSGACT00000017415.2	smg5-201	3283	1027aa	ENSGACP00000017381.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3PIF3	-

.

Summary

.

.