Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Gene: prpf40a ENSGACG00000005886

Description

PRP40 pre-mRNA processing factor 40 homolog A [Source:ZFIN;Acc:ZDB-GENE-030131-274]

Location

GAculeatus_UGA_version5:CM029298.1

About this gene

This gene has 7 transcripts (splice variants) and 208 orthologues.

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSGACT00000059154.1	prpf40a-205	3688	878aa	ENSGACP00000058675.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSGACT00000007830.2	prpf40a-206	3607	851aa	ENSGACP00000007811.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSGACT00000043385.1	prpf40a-207	3532	808aa	ENSGACP00000039673.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSGACT00000037629.1	prpf40a-204	3290	762aa	ENSGACP00000046784.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSGACT00000043952.1	prpf40a-203	3212	736aa	ENSGACP00000028470.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSGACT00000007818.3	prpf40a-201	2400	799aa	ENSGACP00000007799.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSGACT00000060403.1	prpf40a-202	1929	642aa	ENSGACP00000068932.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-

Summary