Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
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ID History
- Gene history

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Gene: BABAM1 ENSGALG00010028586

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Description

BRISC and BRCA1 A complex member 1 [Source:UniProtKB Gene Name;Acc:A0A8V1AH74]

Location

Primary_assembly 28: 3,826,247-3,833,015 forward strand.

bGalGal1.mat.broiler.GRCg7b:CM028509.1

About this gene

This gene has 3 transcripts (splice variants) and 186 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSGALT00010069229.1	BABAM1-201	1496	402aa	ENSGALP00010042671.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V1AH74	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSGALT00010069228.1	BABAM1-202	1508	332aa	ENSGALP00010042670.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V1AJF1	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSGALT00010069227.1	BABAM1-203	1225	376aa	ENSGALP00010042669.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V1AEW2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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