Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: COL16A1 ENSGALG00010017250

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Description

collagen type XVI alpha 1 chain [Source:UniProtKB Gene Name;Acc:A0A8V0Z1M9]

Location

Primary_assembly 23: 5,331,949-5,351,835 reverse strand.

bGalGal1.mat.broiler.GRCg7b:CM028504.1

About this gene

This gene has 2 transcripts (splice variants), 110 orthologues and 45 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSGALT00010041585.1	COL16A1-201	5720	1789aa	ENSGALP00010024330.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V0Z1M4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSGALT00010041595.1	COL16A1-202	5672	1773aa	ENSGALP00010024335.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V0Z1M9	-

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Summary

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