Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: ZNF839 ENSGALG00010017187

.

Description

zinc finger protein 839 [Source:UniProtKB Gene Name;Acc:A0A8V0Z029]

Location

Primary_assembly 5: 49,081,070-49,096,570 forward strand.

bGalGal1.mat.broiler.GRCg7b:CM028486.1

About this gene

This gene has 3 transcripts (splice variants) and 179 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSGALT00010041440.1	ZNF839-203	3679	1060aa	ENSGALP00010024271.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V0Z029	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSGALT00010041444.1	ZNF839-201	3134	881aa	ENSGALP00010024273.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V0Z717	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSGALT00010041446.1	ZNF839-202	2912	807aa	ENSGALP00010024275.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V0Z1G9	-

.

Summary

.

.