Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: RASGEF1A ENSGALG00010011077

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Description

RasGEF domain family member 1A [Source:UniProtKB Gene Name;Acc:A0A8V0YGI5]

Location

Primary_assembly 6: 5,390,042-5,434,124 forward strand.

bGalGal1.mat.broiler.GRCg7b:CM028487.1

About this gene

This gene has 5 transcripts (splice variants), 126 orthologues and 20 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSGALT00010026535.1	RASGEF1A-201	3024	491aa	ENSGALP00010015114.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q3ADN1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSGALT00010026523.1	RASGEF1A-204	4139	486aa	ENSGALP00010015105.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2U9B0	-
ENSGALT00010026531.1	RASGEF1A-203	2442	482aa	ENSGALP00010015111.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V0YGI5	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSGALT00010026527.1	RASGEF1A-202	2263	483aa	ENSGALP00010015108.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BYX9	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSGALT00010026515.1	RASGEF1A-205	904	289aa	ENSGALP00010015099.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V0Y815	-

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Summary

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