Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: RFTN1 ENSGALG00010002247

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Description

raftlin, lipid raft linker 1 [Source:NCBI gene (formerly Entrezgene);Acc:395109]

Location

Primary_assembly 2: 34,224,804-34,318,919 reverse strand.

bGalGal1.mat.broiler.GRCg7b:CM028483.1

About this gene

This gene has 3 transcripts (splice variants), 293 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSGALT00010005085.1	RFTN1-201	3915	644aa	ENSGALP00010002999.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V0XEG4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSGALT00010005089.1	RFTN1-202	4102	596aa	ENSGALP00010003001.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V0X4U6	-
ENSGALT00010005096.1	RFTN1-203	4050	610aa	ENSGALP00010003009.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V0XEH4	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Summary

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