Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: col2a1a ENSELUG00000034350

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Description

collagen, type II, alpha 1a [Ensembl NN prediction with score 94.43%]

Location

Primary_assembly 17: 42,672,868-42,729,105 reverse strand.

fEsoLuc1.pri:CM021609.1

About this gene

This gene has 6 transcripts (splice variants), 188 orthologues and 63 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSELUT00000047357.2	col2a1a-204	5682	1493aa	ENSELUP00000049715.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6Q2X900	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSELUT00000023357.3	col2a1a-205	5463	1420aa	ENSELUP00000035547.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3P9A3G6	-
ENSELUT00000070023.2	col2a1a-206	5073	1290aa	ENSELUP00000055269.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6Q2XML9	-
ENSELUT00000069794.2	col2a1a-201	4859	1285aa	ENSELUP00000080050.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6Q2ZQX5	-
ENSELUT00000059396.2	col2a1a-203	4697	1231aa	ENSELUP00000057854.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6Q2XUX4	-
ENSELUT00000083764.2	col2a1a-202	4616	1204aa	ENSELUP00000062498.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6Q2YAB5	-

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Summary

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