Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: VARS1 ENSELUG00000006550

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Description

valyl-tRNA synthetase 1 [Ensembl NN prediction with score 99.61%]

Location

Primary_assembly 20: 19,107,269-19,122,249 reverse strand.

fEsoLuc1.pri:CM021612.1

About this gene

This gene has 8 transcripts (splice variants), 194 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSELUT00000056536.2	VARS1-201	4555	1311aa	ENSELUP00000045412.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6Q2WWX3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSELUT00000010515.3	VARS1-202	4410	1299aa	ENSELUP00000029570.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3P8ZLN4	-
ENSELUT00000073560.2	VARS1-206	3868	1222aa	ENSELUP00000060526.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6Q2Y555	-
ENSELUT00000087035.2	VARS1-207	3862	1220aa	ENSELUP00000079456.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6Q2ZNU4	-
ENSELUT00000082115.2	VARS1-205	3777	1241aa	ENSELUP00000049898.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6Q2X8Z8	-
ENSELUT00000068971.2	VARS1-204	3354	1100aa	ENSELUP00000059300.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6Q2Y1T2	-
ENSELUT00000080605.2	VARS1-203	3270	1072aa	ENSELUP00000051542.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6Q2XE56	-
ENSELUT00000058185.2	VARS1-208	2673	890aa	ENSELUP00000078463.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6Q2ZKL2	-

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Summary

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